RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 OR2H2O95918 312 aa12.67□□□□□ -0.38
RAB11FIP3-208ENST00000464263 GABRA5P31644 462 aa12.67□□□□□ -0.38
RAB11FIP3-208ENST00000464263 RPL31P62899 125 aaKnown RBP12.67□□□□□ -0.38
RAB11FIP3-208ENST00000464263 FABP5Q01469 135 aa12.67□□□□□ -0.38
RAB11FIP3-208ENST00000464263 KCTD21Q4G0X4 260 aa12.67□□□□□ -0.38
RAB11FIP3-208ENST00000464263 METTL11BQ5VVY1 283 aa12.67□□□□□ -0.38
RAB11FIP3-208ENST00000464263 C1orf122Q6ZSJ8 110 aa12.67□□□□□ -0.38
RAB11FIP3-208ENST00000464263 OR8H2Q8N162 312 aa12.67□□□□□ -0.38
RAB11FIP3-208ENST00000464263 JAGN1Q8N5M9 183 aa12.67□□□□□ -0.38
RAB11FIP3-208ENST00000464263 OR4S1Q8NGB4 309 aa12.67□□□□□ -0.38
RAB11FIP3-208ENST00000464263 OR4M1Q8NGD0 313 aa12.67□□□□□ -0.38
RAB11FIP3-208ENST00000464263 OR10K1Q8NGX5 313 aa12.67□□□□□ -0.38
RAB11FIP3-208ENST00000464263 METTL9Q9H1A3 318 aa12.67□□□□□ -0.38
RAB11FIP3-208ENST00000464263 TCF7L1Q9HCS4 588 aa12.67□□□□□ -0.38
RAB11FIP3-208ENST00000464263 EXOSC4Q9NPD3 245 aaKnown RBP12.67□□□□□ -0.38
RAB11FIP3-208ENST00000464263 ONECUT1Q9UBC0 465 aa12.67□□□□□ -0.38
RAB11FIP3-208ENST00000464263 ZNF69Q9UC07 566 aa12.67□□□□□ -0.38
RAB11FIP3-208ENST00000464263 JMJD1CQ15652 2540 aa12.67□□□□□ -0.38
RAB11FIP3-208ENST00000464263 A0A0G2JK05 382 aa12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 A0A1W2PQ09 198 aa12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 SIRPB1O00241 398 aa12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 RGS9O75916 674 aaPredicted RBP12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 HTR3BO95264 441 aa12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 GABRR1P24046 479 aa12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 SCN1BQ07699 218 aa12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 SCGB2A2Q13296 93 aa12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 PDCD1Q15116 288 aa12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 HSD17B12Q53GQ0 312 aa12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 NKAIN3Q8N8D7 197 aa12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 OR4D6Q8NGJ1 314 aa12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 TBC1D15Q8TC07 691 aa12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 FCGR1BQ92637 280 aa12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 MUL1Q969V5 352 aa12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 C1orf147Q96MC9 270 aaPredicted RBP12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 NR1H4Q96RI1 486 aaPredicted RBP12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 UQCC2Q9BRT2 126 aa12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 CHST6Q9GZX3 395 aa12.66□□□□□ -0.38
RAB11FIP3-208ENST00000464263 IGHV3OR16-10A0A075B7F0 116 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 TRAV40A0A0B4J280 105 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 CENPVL3A0A0U1RRI6 287 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 M0R1W7 72 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 SLC33A1O00400 549 aaPredicted RBP12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 DEGS1O15121 323 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 FPR2P25090 351 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 OR3A1P47881 315 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 IL13RA2Q14627 380 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 GRK1Q15835 563 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 PIGYQ3MUY2 71 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 NHLRC3Q5JS37 347 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 C1orf100Q5SVJ3 147 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 CD200R1LQ6Q8B3 271 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 C9orf139Q6ZV77 190 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 GDPD3Q7L5L3 318 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 VMO1Q7Z5L0 202 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 CMTM4Q8IZR5 234 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 FAM185AQ8N0U4 392 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 BCL6BQ8N143 479 aaPredicted RBP12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 OSR2Q8N2R0 312 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 C11orf42Q8N5U0 333 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 CHST4Q8NCG5 386 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 C22orf15Q8WYQ4 148 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 S100A13Q99584 98 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 OCEL1Q9H607 264 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 NDUFB11Q9NX14 153 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 MRPS28Q9Y2Q9 187 aaKnown RBP12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 SOX21Q9Y651 276 aaPredicted RBP12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 KIAA2026Q5HYC2 2103 aa12.65□□□□□ -0.38
RAB11FIP3-208ENST00000464263 A0A1W2PP11 408 aa12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 CCRL2O00421 344 aa12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 MGST3O14880 152 aa12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 ZNF780AO75290 641 aaPredicted RBP12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 CSTBP04080 98 aaKnown RBP12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 ZNF44P15621 663 aa12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 BPIFB3P59826 476 aa12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 MEF2CQ06413 473 aaPredicted RBP12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 GPR176Q14439 515 aa12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 ZNF273Q14593 569 aa12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 SLC22A6Q4U2R8 563 aa12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 METAP1DQ6UB28 335 aaPredicted RBP12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 GLIPR1L1Q6UWM5 242 aa12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 PPP1R35Q8TAP8 253 aa12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 TNFRSF14Q92956 283 aa12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 LHX4Q969G2 390 aa12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 FOXRED1Q96CU9 486 aaPredicted RBP12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 GFI1Q99684 422 aa12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 SLC6A7Q99884 636 aa12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 UNKLQ9H9P5 680 aaKnown RBP12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 PCDHB16Q9NRJ7 776 aa12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 ST3GAL6Q9Y274 331 aa12.64□□□□□ -0.39
RAB11FIP3-208ENST00000464263 TRAV24A0A0B4J272 114 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 TRDV1A0A1B0GX56 115 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 ARL6IP5O75915 188 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 CSN2P05814 226 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 GTF2F2P13984 249 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 SERPINA2P20848 420 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 GALP22466 123 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 PRTN3P24158 256 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 PSMB9P28065 219 aa12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 ERP29P30040 261 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP3-208ENST00000464263 DLX1P56177 255 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms