RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 HLA-GP17693 338 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 SRSF4Q08170 494 aaKnown RBP10.91□□□□□ -0.66
VAPB-203ENST00000463370 IL24Q13007 206 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 IGSF11Q5DX21 431 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 C1orf185Q5T7R7 199 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 Q8NA96 180 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 SCCPDHQ8NBX0 429 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 PPP1R1CQ8WVI7 109 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 PCNPQ8WW12 178 aaKnown RBP10.91□□□□□ -0.66
VAPB-203ENST00000463370 TOMM40LQ969M1 308 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 ADAT1Q9BUB4 502 aaKnown RBP10.91□□□□□ -0.66
VAPB-203ENST00000463370 NECAP2Q9NVZ3 263 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 TINAGQ9UJW2 476 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 ADGRG4Q8IZF6 3080 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 INTS1Q8N201 2190 aaKnown RBP10.9□□□□□ -0.66
VAPB-203ENST00000463370 TRAV24A0A0B4J272 114 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 FAM90A10PA6NDY2 464 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 FAM90A18PA6NE21 464 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 FAM90A16PA6NEW6 464 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 FAM90A20PA6NIJ5 464 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 FAM90A8PA6NJQ4 464 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 FAM90A7PA6NKC0 464 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 OR5H1A6NKK0 313 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 FAM90A22PA8MWA6 464 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 FAM90A12PA8MX19 464 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 FAM90A5PA8MXJ8 464 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 FAM90A23PA8MXZ1 464 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 IQCF6A8MYZ5 107 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 M0R233 179 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 HS3ST1O14792 307 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 GFRA3O60609 400 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 FAM90A15PP0C7V4 464 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 FAM90A13PP0C7W8 464 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 FAM90A14PP0C7W9 464 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 FAM90A24PP0C7X0 464 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 SERPINF1P36955 418 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 FXYD4P59646 89 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 ZNF154Q13106 437 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 P2RY6Q15077 328 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 TBR1Q16650 682 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 FAM76BQ5HYJ3 339 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 ZNF324BQ6AW86 544 aaPredicted RBP10.9□□□□□ -0.66
VAPB-203ENST00000463370 TMEM211Q6ICI0 200 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 DHRS11Q6UWP2 260 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 C20orf204Q6ZNR8 217 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 ZNF767PQ75MW2 155 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 DECR2Q9NUI1 292 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 SLC25A15Q9Y619 301 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 IGHV2OR16-5A0A0B4J2B6 119 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 C13orf42A0A1B0GVH6 325 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 RFPL4AA6NLU0 287 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 HMSDA8MTL9 139 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 RFPL4AL1F8VTS6 287 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 CDIPTO14735 213 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 MLNRO43193 412 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 KCNAB3O43448 404 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 NAPSAO96009 420 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 FCGR2CP31995 323 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 EXOSC2Q13868 293 aaKnown RBP10.9□□□□□ -0.66
VAPB-203ENST00000463370 LPCAT3Q6P1A2 487 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 FAM58AQ8N1B3 248 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 CISD2Q8N5K1 135 aaKnown RBP10.9□□□□□ -0.66
VAPB-203ENST00000463370 SUMF2Q8NBJ7 301 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 RDH5Q92781 318 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 RTL8AQ9BWD3 113 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 PKIBQ9C010 78 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 ZNF286AQ9HBT8 521 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 CHMP1AQ9HD42 196 aaPredicted RBP10.9□□□□□ -0.66
VAPB-203ENST00000463370 RDH8Q9NYR8 311 aa10.9□□□□□ -0.66
VAPB-203ENST00000463370 J3QT63 122 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 FABP6P51161 128 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 AP2S1P53680 142 aaPredicted RBP10.89□□□□□ -0.67
VAPB-203ENST00000463370 SURF2Q15527 256 aaPredicted RBP10.89□□□□□ -0.67
VAPB-203ENST00000463370 MSMPQ1L6U9 139 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 FAM180AQ6UWF9 173 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 BEND4Q6ZU67 534 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 C22orf34Q6ZV56 151 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 TMUB2Q71RG4 321 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 S100PBPQ96BU1 408 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 SCGB3A2Q96PL1 93 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 TMEM165Q9HC07 324 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 ITGB1BP2Q9UKP3 347 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 IGF2RP11717 2491 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 GRPP07492 148 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 SCTP09683 121 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 PMELP40967 661 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 GTF3C1Q12789 2109 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 ATXN7L3Q14CW9 347 aaPredicted RBP10.89□□□□□ -0.67
VAPB-203ENST00000463370 MPV17LQ2QL34 196 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 PRR30Q53SZ7 412 aaPredicted RBP10.89□□□□□ -0.67
VAPB-203ENST00000463370 Q6ZR03 302 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 FAM57AQ8TBR7 257 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 NEK7Q8TDX7 302 aa10.89□□□□□ -0.67
VAPB-203ENST00000463370 LRP5LA4QPB2 252 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 C5orf51A6NDU8 294 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 K7ENP7 123 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 ZNF83P51522 516 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 TDGF1P3P51864 188 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 HERPUD1Q15011 391 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 ASB13Q8WXK3 278 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms