RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 C21orf62Q9NYP8 219 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 NAGKQ9UJ70 344 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 RAB22AQ9UL26 194 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 INSIG2Q9Y5U4 225 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 ZNF706Q9Y5V0 76 aaPredicted RBP2.5□□□□□ -2.01
USH2A-203ENST00000463147 GOLGA3Q08378 1498 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 SCAPERQ9BY12 1400 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 CNTLNQ9NXG0 1405 aa2.5□□□□□ -2.01
USH2A-203ENST00000463147 RAB3GAP2Q9H2M9 1393 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 CABIN1Q9Y6J0 2220 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 TICRRQ7Z2Z1 1910 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 IGHV3-49A0A0A0MS15 119 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 A0A0G2JMP0 313 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 A0A0X1KG70 313 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 MYBPHLA2RUH7 354 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 GOLGA8IPA6NC78 632 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 GPR171O14626 319 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 UBDO15205 165 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 GYG2O15488 501 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 CYTH3O43739 400 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 SYNGR1O43759 233 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 CDK1P06493 297 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 OR4Q2P0C623 313 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 SEC11BP0C7V7 166 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 PET100P0DJ07 73 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 CD28P10747 220 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 CDC34P49427 236 aaPredicted RBP2.49□□□□□ -2.01
USH2A-203ENST00000463147 TAS2R43P59537 309 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 RHOAP61586 193 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 DYNLL1P63167 89 aaKnown RBP2.49□□□□□ -2.01
USH2A-203ENST00000463147 HBG1P69891 147 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 HBG2P69892 147 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 PITPNAQ00169 270 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 PTGES3Q15185 160 aaKnown RBP2.49□□□□□ -2.01
USH2A-203ENST00000463147 MARCH3Q86UD3 253 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 C10orf107Q8IVU9 208 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 ITPRIPQ8IWB1 547 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 ENTHD1Q8IYW4 607 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 SAXO1Q8IYX7 474 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 RIBC1Q8N443 379 aaPredicted RBP2.49□□□□□ -2.01
USH2A-203ENST00000463147 C2orf73Q8N5S3 287 aaPredicted RBP2.49□□□□□ -2.01
USH2A-203ENST00000463147 ZNF555Q8NEP9 628 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 LFNGQ8NES3 379 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 ORAOV1Q8WV07 137 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 SLC25A46Q96AG3 418 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 YIPF6Q96EC8 236 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 ZNF285Q96NJ3 590 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 RNF157Q96PX1 679 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 MRPL20Q9BYC9 149 aaKnown RBP2.49□□□□□ -2.01
USH2A-203ENST00000463147 RHOFQ9HBH0 211 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 SDHAF3Q9NRP4 125 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 RFNGQ9Y644 331 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 CCDC144AA2RUR9 1427 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 VPS8Q8N3P4 1428 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 CHD2O14647 1828 aaKnown RBP2.49□□□□□ -2.01
USH2A-203ENST00000463147 PCM1Q15154 2024 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 TONSLQ96HA7 1378 aa2.49□□□□□ -2.01
USH2A-203ENST00000463147 IBTKQ9P2D0 1353 aaPredicted RBP2.49□□□□□ -2.01
USH2A-203ENST00000463147 BAZ2AQ9UIF9 1905 aaKnown RBP2.48□□□□□ -2.01
USH2A-203ENST00000463147 FTCDNL1E5RQL4 147 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 ATP8B1O43520 1251 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 PDCD6O75340 191 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 GATBO75879 557 aaKnown RBP2.48□□□□□ -2.01
USH2A-203ENST00000463147 EPPINO95925 133 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 CA2P00918 260 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 PSKH1P11801 424 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 NEFHP12036 1026 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 GRPRP30550 384 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 ERFP50548 548 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 SLC18A1P54219 525 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 RAB8AP61006 207 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 UBE2IP63279 158 aaKnown RBP2.48□□□□□ -2.01
USH2A-203ENST00000463147 SARNPP82979 210 aaKnown RBP2.48□□□□□ -2.01
USH2A-203ENST00000463147 SSX1Q16384 188 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 C4orf26Q17RF5 130 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 LAMTOR1Q6IAA8 161 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 GLYATQ6IB77 296 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 MORN3Q6PF18 240 aaPredicted RBP2.48□□□□□ -2.01
USH2A-203ENST00000463147 CASP12Q6UXS9 341 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 CLEC20AQ6ZU45 233 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 FAM231DQ6ZW35 169 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 GALNT10Q86SR1 603 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 PDPNQ86YL7 162 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 ORMDL3Q8N138 153 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 KRT222Q8N1A0 295 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 STK40Q8N2I9 435 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 GATD1Q8NB37 220 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 OR5M1Q8NGP8 315 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 OR2K2Q8NGT1 345 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 SYNPRQ8TBG9 265 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 ITFG2Q969R8 447 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 PITX2Q99697 317 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 APOL4Q9BPW4 351 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 MARVELD1Q9BSK0 173 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 CHCHD7Q9BUK0 85 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 DRC3Q9H069 523 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 SLC25A31Q9H0C2 315 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 OR51E2Q9H255 320 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 NKIRAS1Q9NYS0 192 aa2.48□□□□□ -2.01
USH2A-203ENST00000463147 FHAD1B1AJZ9 1412 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms