RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	CSTB	P04080	98 aa	Known RBP	7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	MMP9	P14780	707 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	PTGFR	P43088	359 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	RPS25	P62851	125 aa	Known RBP	7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	BAMBI	Q13145	260 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	C11orf91	Q3C1V1	193 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	SLC22A6	Q4U2R8	563 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	ACSM3	Q53FZ2	586 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	SPIN3	Q5JUX0	258 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	FAM27D1	Q5T7N8	215 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	TMEM200B	Q69YZ2	307 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	ZNF529	Q6P280	563 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	CEACAM19	Q7Z692	300 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	TRAPPC6B	Q86SZ2	158 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	KIR3DL3	Q8N743	410 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	TPRX1	Q8N7U7	411 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	OR5D13	Q8NGL4	314 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	C8orf46	Q8TAG6	207 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	THRSP	Q92748	146 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	MUL1	Q969V5	352 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	SNX22	Q96L94	193 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	JMJD8	Q96S16	334 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	METTL9	Q9H1A3	318 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	PPA2	Q9H2U2	334 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	TCF7L1	Q9HCS4	588 aa		7.91	□□□□□ -1.14
PSMD4-208	ENST00000462970	CENPVL3	A0A0U1RRI6	287 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	PIN1P1	O15428	100 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	DENR	O43583	198 aa	Known RBP	7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	OR2H2	O95918	312 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	ALDOB	P05062	364 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	CD1A	P06126	327 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	CCL3L1	P16619	93 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	IGFBP3	P17936	291 aa	Predicted RBP	7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	FST	P19883	344 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	SERPINA2	P20848	420 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	COX7A1	P24310	79 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	MTNR1B	P49286	362 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	ACSM1	Q08AH1	577 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	ZNF273	Q14593	569 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	DEFB112	Q30KQ8	113 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	KRTAP24-1	Q3LI83	254 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	PIGY	Q3MUY2	71 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	PAN3	Q58A45	887 aa	Known RBP	7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	CRIP3	Q6Q6R5	217 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	ZNF782	Q6ZMW2	699 aa	Predicted RBP	7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	C17orf107	Q6ZR85	190 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	ZNF367	Q7RTV3	350 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	OR8H2	Q8N162	312 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	PNKD	Q8N490	385 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	SVOP	Q8N4V2	548 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	MS4A15	Q8N5U1	240 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970		Q8N7P7	452 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	OR4S1	Q8NGB4	309 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	PPP1R35	Q8TAP8	253 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	MGLL	Q99685	303 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	FAM234A	Q9H0X4	552 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	SLITRK2	Q9H156	845 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	METTL8	Q9H825	291 aa	Known RBP	7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	MRPS28	Q9Y2Q9	187 aa	Known RBP	7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970	FAM96B	Q9Y3D0	163 aa		7.9	□□□□□ -1.14
PSMD4-208	ENST00000462970		A0A0A6YYJ9	748 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	hCG_1809904	A0A1W2PP81	198 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970		A0A1W2PPE2	198 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970		A0A1W2PR64	198 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970		A0A1W2PRV1	198 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	DNAJC9-AS1	A6NH13	148 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	RNASEK-C17orf49	H0YIS7	233 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	TRIM77	I1YAP6	450 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970		M0R1W7	72 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	MGST3	O14880	152 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	PSPN	O60542	156 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	ZNF737	O75373	536 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	OR3A1	P47881	315 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	BMX	P51813	675 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	HILS1	P60008	231 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	ERVFRD-1	P60508	538 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	GABARAPL2	P60520	117 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	ACTG1	P63261	375 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	MLLT11	Q13015	90 aa	Predicted RBP	7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	ATXN7L3	Q14CW9	347 aa	Predicted RBP	7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	ZNF146	Q15072	292 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	HSD17B12	Q53GQ0	312 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	NCR3LG1	Q68D85	454 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	AWAT2	Q6E213	333 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	GLIPR1L1	Q6UWM5	242 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	OSR2	Q8N2R0	312 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	PXT1	Q8NFP0	134 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	TBC1D15	Q8TC07	691 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	NEK7	Q8TDX7	302 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	ZNF48	Q96MX3	618 aa	Predicted RBP	7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	C19orf24	Q9BVV8	132 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	RHOF	Q9HBH0	211 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	FOXJ3	Q9UPW0	622 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970	STAB1	Q9NY15	2570 aa		7.89	□□□□□ -1.15
PSMD4-208	ENST00000462970		A0A0G2JK05	382 aa		7.88	□□□□□ -1.15
PSMD4-208	ENST00000462970		A0A0U1RQK1	487 aa		7.88	□□□□□ -1.15
PSMD4-208	ENST00000462970	hADV38S2	A0JD32	116 aa		7.88	□□□□□ -1.15
PSMD4-208	ENST00000462970	MEIOC	A2RUB1	952 aa		7.88	□□□□□ -1.15
PSMD4-208	ENST00000462970	FUOM	A2VDF0	154 aa		7.88	□□□□□ -1.15
PSMD4-208	ENST00000462970	SLC33A1	O00400	549 aa	Predicted RBP	7.88	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms