RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 SNTNA6NMZ2 147 aa12.52□□□□□ -0.41
NUP50-213ENST00000461437 WBP4O75554 376 aaKnown RBP12.52□□□□□ -0.41
NUP50-213ENST00000461437 HCKP08631 526 aa12.52□□□□□ -0.41
NUP50-213ENST00000461437 SOX2P48431 317 aa12.52□□□□□ -0.41
NUP50-213ENST00000461437 EFNB2P52799 333 aa12.52□□□□□ -0.41
NUP50-213ENST00000461437 AESQ08117 197 aa12.52□□□□□ -0.41
NUP50-213ENST00000461437 ZNF146Q15072 292 aa12.52□□□□□ -0.41
NUP50-213ENST00000461437 UTF1Q5T230 341 aa12.52□□□□□ -0.41
NUP50-213ENST00000461437 C1QL4Q86Z23 238 aa12.52□□□□□ -0.41
NUP50-213ENST00000461437 Q8IYB0 196 aa12.52□□□□□ -0.41
NUP50-213ENST00000461437 OR51A2Q8NGJ7 313 aa12.52□□□□□ -0.41
NUP50-213ENST00000461437 CNIH3Q8TBE1 160 aa12.52□□□□□ -0.41
NUP50-213ENST00000461437 TSEN15Q8WW01 171 aaKnown RBP12.52□□□□□ -0.41
NUP50-213ENST00000461437 RGP1Q92546 391 aaPredicted RBP12.52□□□□□ -0.41
NUP50-213ENST00000461437 SPSB1Q96BD6 273 aa12.52□□□□□ -0.41
NUP50-213ENST00000461437 EXOSC4Q9NPD3 245 aaKnown RBP12.52□□□□□ -0.41
NUP50-213ENST00000461437 FBLN5Q9UBX5 448 aa12.52□□□□□ -0.41
NUP50-213ENST00000461437 IGHV2-26A0A0B4J1V2 119 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 EBAG9O00559 213 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 HSPB6O14558 160 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 PLXNB1O43157 2135 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 KDM4BO94953 1096 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 LIMS3P0CW19 117 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 LIMS4P0CW20 117 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 VSIG10L2P0DP72 767 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 ZNF44P15621 663 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 GLIPR1P48060 266 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 P2RX3P56373 397 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 ZP1P60852 638 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 ATXN7L3Q14CW9 347 aaPredicted RBP12.51□□□□□ -0.41
NUP50-213ENST00000461437 ZSCAN26Q16670 478 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 LRRC36Q1X8D7 754 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 FBLN7Q53RD9 439 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 OR2G6Q5TZ20 316 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 Q6P435 159 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 Q6ZS46 218 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 SYS1Q8N2H4 156 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 KLHDC1Q8N7A1 406 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 OR11H6Q8NGC7 330 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 OR4C13Q8NGP0 309 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 OR5AK2Q8NH90 309 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 ORAI1Q96D31 301 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 NR1H4Q96RI1 486 aaPredicted RBP12.51□□□□□ -0.41
NUP50-213ENST00000461437 MMP27Q9H306 513 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 DHDHQ9UQ10 334 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 TCF19Q9Y242 345 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 LINC00312Q9Y6C7 94 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 SESN1Q9Y6P5 492 aa12.51□□□□□ -0.41
NUP50-213ENST00000461437 MGST3O14880 152 aa12.5□□□□□ -0.41
NUP50-213ENST00000461437 FADS2O95864 444 aaKnown RBP12.5□□□□□ -0.41
NUP50-213ENST00000461437 TMEM225BP0DP42 221 aa12.5□□□□□ -0.41
NUP50-213ENST00000461437 CD24P25063 80 aa12.5□□□□□ -0.41
NUP50-213ENST00000461437 ETV1P50549 477 aa12.5□□□□□ -0.41
NUP50-213ENST00000461437 MEF2CQ06413 473 aaPredicted RBP12.5□□□□□ -0.41
NUP50-213ENST00000461437 RAB40BQ12829 278 aa12.5□□□□□ -0.41
NUP50-213ENST00000461437 TMEM95Q3KNT9 176 aa12.5□□□□□ -0.41
NUP50-213ENST00000461437 SPIN3Q5JUX0 258 aa12.5□□□□□ -0.41
NUP50-213ENST00000461437 OR13C5Q8NGS8 318 aa12.5□□□□□ -0.41
NUP50-213ENST00000461437 OR10K1Q8NGX5 313 aa12.5□□□□□ -0.41
NUP50-213ENST00000461437 NDNFQ8TB73 568 aa12.5□□□□□ -0.41
NUP50-213ENST00000461437 COQ2Q96H96 371 aa12.5□□□□□ -0.41
NUP50-213ENST00000461437 Q96MT0 163 aa12.5□□□□□ -0.41
NUP50-213ENST00000461437 OR5M11Q96RB7 305 aa12.5□□□□□ -0.41
NUP50-213ENST00000461437 PPIL3Q9H2H8 161 aaKnown RBP12.5□□□□□ -0.41
NUP50-213ENST00000461437 TMEM133Q9H2Q1 129 aa12.5□□□□□ -0.41
NUP50-213ENST00000461437 ZNF702PQ9H963 129 aa12.5□□□□□ -0.41
NUP50-213ENST00000461437 TAS2R4Q9NYW5 299 aa12.5□□□□□ -0.41
NUP50-213ENST00000461437 ZNF581Q9P0T4 197 aa12.5□□□□□ -0.41
NUP50-213ENST00000461437 TBL2Q9Y4P3 447 aaKnown RBP12.5□□□□□ -0.41
NUP50-213ENST00000461437 SIRT4Q9Y6E7 314 aaPredicted RBP12.5□□□□□ -0.41
NUP50-213ENST00000461437 A0A0G2JK05 382 aa12.49□□□□□ -0.41
NUP50-213ENST00000461437 A6NDX4 124 aa12.49□□□□□ -0.41
NUP50-213ENST00000461437 SLC33A1O00400 549 aaPredicted RBP12.49□□□□□ -0.41
NUP50-213ENST00000461437 SH2D1BO14796 132 aa12.49□□□□□ -0.41
NUP50-213ENST00000461437 SULT1B1O43704 296 aa12.49□□□□□ -0.41
NUP50-213ENST00000461437 MPZL2O60487 215 aa12.49□□□□□ -0.41
NUP50-213ENST00000461437 MT-ND2P03891 347 aa12.49□□□□□ -0.41
NUP50-213ENST00000461437 KIR2DS4P43632 304 aa12.49□□□□□ -0.41
NUP50-213ENST00000461437 GBX2P52951 348 aaPredicted RBP12.49□□□□□ -0.41
NUP50-213ENST00000461437 SLC34A1Q06495 639 aa12.49□□□□□ -0.41
NUP50-213ENST00000461437 CDK5R1Q15078 307 aa12.49□□□□□ -0.41
NUP50-213ENST00000461437 KISS1Q15726 138 aa12.49□□□□□ -0.41
NUP50-213ENST00000461437 AANATQ16613 207 aa12.49□□□□□ -0.41
NUP50-213ENST00000461437 ZNF691Q5VV52 312 aa12.49□□□□□ -0.41
NUP50-213ENST00000461437 SATL1Q86VE3 508 aa12.49□□□□□ -0.41
NUP50-213ENST00000461437 OR2T6Q8NHC8 308 aa12.49□□□□□ -0.41
NUP50-213ENST00000461437 NPFFR1Q9GZQ6 430 aa12.49□□□□□ -0.41
NUP50-213ENST00000461437 COMMD4Q9H0A8 199 aa12.49□□□□□ -0.41
NUP50-213ENST00000461437 ABCB10Q9NRK6 738 aa12.49□□□□□ -0.41
NUP50-213ENST00000461437 SMPD3Q9NY59 655 aaPredicted RBP12.49□□□□□ -0.41
NUP50-213ENST00000461437 RPL36Q9Y3U8 105 aaKnown RBP12.49□□□□□ -0.41
NUP50-213ENST00000461437 TGP01266 2768 aa12.48□□□□□ -0.41
NUP50-213ENST00000461437 TMEM212A6NML5 194 aa12.48□□□□□ -0.41
NUP50-213ENST00000461437 VGLL3A8MV65 326 aa12.48□□□□□ -0.41
NUP50-213ENST00000461437 GABRPO00591 440 aa12.48□□□□□ -0.41
NUP50-213ENST00000461437 LALBAP00709 142 aa12.48□□□□□ -0.41
NUP50-213ENST00000461437 RBP4P02753 201 aa12.48□□□□□ -0.41
NUP50-213ENST00000461437 CDK2P24941 298 aa12.48□□□□□ -0.41
NUP50-213ENST00000461437 HERPUD1Q15011 391 aa12.48□□□□□ -0.41
NUP50-213ENST00000461437 SERPINA12Q8IW75 414 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms