RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 ZNF679Q8IYX0 411 aa13.82□□□□□ -0.2
TOP3A-202ENST00000461127 LINC00482Q8N8I6 264 aa13.82□□□□□ -0.2
TOP3A-202ENST00000461127 RNF133Q8WVZ7 376 aa13.82□□□□□ -0.2
TOP3A-202ENST00000461127 ZNF649Q9BS31 505 aa13.82□□□□□ -0.2
TOP3A-202ENST00000461127 ISG20L2Q9H9L3 353 aaKnown RBP13.82□□□□□ -0.2
TOP3A-202ENST00000461127 C19orf12Q9NSK7 152 aa13.82□□□□□ -0.2
TOP3A-202ENST00000461127 RHBDD3Q9Y3P4 386 aa13.82□□□□□ -0.2
TOP3A-202ENST00000461127 MPC1Q9Y5U8 109 aa13.82□□□□□ -0.2
TOP3A-202ENST00000461127 DYNC2H1Q8NCM8 4307 aaKnown RBP13.81□□□□□ -0.2
TOP3A-202ENST00000461127 PRR32B1ATL7 298 aa13.81□□□□□ -0.2
TOP3A-202ENST00000461127 MAGEB4O15481 346 aaPredicted RBP13.81□□□□□ -0.2
TOP3A-202ENST00000461127 ZNF254O75437 659 aa13.81□□□□□ -0.2
TOP3A-202ENST00000461127 RHBDL1O75783 438 aa13.81□□□□□ -0.2
TOP3A-202ENST00000461127 ARG1P05089 322 aa13.81□□□□□ -0.2
TOP3A-202ENST00000461127 HSMCR30P0CW71 290 aa13.81□□□□□ -0.2
TOP3A-202ENST00000461127 HSD11B1P28845 292 aa13.81□□□□□ -0.2
TOP3A-202ENST00000461127 GSK3AP49840 483 aa13.81□□□□□ -0.2
TOP3A-202ENST00000461127 RIDAP52758 137 aaKnown RBP13.81□□□□□ -0.2
TOP3A-202ENST00000461127 GBX2P52951 348 aaPredicted RBP13.81□□□□□ -0.2
TOP3A-202ENST00000461127 SSX2Q16385 188 aa13.81□□□□□ -0.2
TOP3A-202ENST00000461127 DMRTC1Q5HYR2 192 aa13.81□□□□□ -0.2
TOP3A-202ENST00000461127 TCTEX1D4Q5JR98 221 aa13.81□□□□□ -0.2
TOP3A-202ENST00000461127 UBE2UQ5VVX9 321 aa13.81□□□□□ -0.2
TOP3A-202ENST00000461127 EGFL6Q8IUX8 553 aa13.81□□□□□ -0.2
TOP3A-202ENST00000461127 DYNAPQ8N1N2 210 aa13.81□□□□□ -0.2
TOP3A-202ENST00000461127 OR51D1Q8NGF3 324 aa13.81□□□□□ -0.2
TOP3A-202ENST00000461127 MUC7Q8TAX7 377 aa13.81□□□□□ -0.2
TOP3A-202ENST00000461127 BABAM2Q9NXR7 383 aa13.81□□□□□ -0.2
TOP3A-202ENST00000461127 MRM2Q9UI43 246 aaKnown RBP13.81□□□□□ -0.2
TOP3A-202ENST00000461127 LSM2Q9Y333 95 aaKnown RBP13.81□□□□□ -0.2
TOP3A-202ENST00000461127 IGKV1D-17A0A075B6S4 117 aa13.8□□□□□ -0.2
TOP3A-202ENST00000461127 hCG_38984A0A1B0GV85 526 aa13.8□□□□□ -0.2
TOP3A-202ENST00000461127 RPP14O95059 124 aaKnown RBP13.8□□□□□ -0.2
TOP3A-202ENST00000461127 PSG2P11465 335 aa13.8□□□□□ -0.2
TOP3A-202ENST00000461127 JUNBP17275 347 aaPredicted RBP13.8□□□□□ -0.2
TOP3A-202ENST00000461127 AZGP1P25311 298 aaKnown RBP13.8□□□□□ -0.2
TOP3A-202ENST00000461127 OPRL1P41146 370 aa13.8□□□□□ -0.2
TOP3A-202ENST00000461127 DYNLT3P51808 116 aa13.8□□□□□ -0.2
TOP3A-202ENST00000461127 GRB2P62993 217 aaKnown RBP13.8□□□□□ -0.2
TOP3A-202ENST00000461127 DGCR2P98153 550 aa13.8□□□□□ -0.2
TOP3A-202ENST00000461127 MRPL28Q13084 256 aaKnown RBP13.8□□□□□ -0.2
TOP3A-202ENST00000461127 ZNF684Q5T5D7 378 aa13.8□□□□□ -0.2
TOP3A-202ENST00000461127 XAF1Q6GPH4 301 aa13.8□□□□□ -0.2
TOP3A-202ENST00000461127 DEGS2Q6QHC5 323 aa13.8□□□□□ -0.2
TOP3A-202ENST00000461127 ZNF782Q6ZMW2 699 aaPredicted RBP13.8□□□□□ -0.2
TOP3A-202ENST00000461127 HAVCR2Q8TDQ0 301 aa13.8□□□□□ -0.2
TOP3A-202ENST00000461127 MUL1Q969V5 352 aa13.8□□□□□ -0.2
TOP3A-202ENST00000461127 SGK3Q96BR1 496 aa13.8□□□□□ -0.2
TOP3A-202ENST00000461127 PPP1R3EQ9H7J1 279 aa13.8□□□□□ -0.2
TOP3A-202ENST00000461127 NIPAL2Q9H841 368 aa13.8□□□□□ -0.2
TOP3A-202ENST00000461127 INMTO95050 263 aa13.79□□□□□ -0.2
TOP3A-202ENST00000461127 APOC1P02654 83 aa13.79□□□□□ -0.2
TOP3A-202ENST00000461127 RPL5P46777 297 aaKnown RBP13.79□□□□□ -0.2
TOP3A-202ENST00000461127 CX3CR1P49238 355 aa13.79□□□□□ -0.2
TOP3A-202ENST00000461127 TAS2R43P59537 309 aa13.79□□□□□ -0.2
TOP3A-202ENST00000461127 GFOD2Q3B7J2 385 aa13.79□□□□□ -0.2
TOP3A-202ENST00000461127 ZNF829Q3KNS6 432 aaPredicted RBP13.79□□□□□ -0.2
TOP3A-202ENST00000461127 TMEM200BQ69YZ2 307 aa13.79□□□□□ -0.2
TOP3A-202ENST00000461127 MRPL41Q8IXM3 137 aaKnown RBP13.79□□□□□ -0.2
TOP3A-202ENST00000461127 C11orf42Q8N5U0 333 aa13.79□□□□□ -0.2
TOP3A-202ENST00000461127 OR52H1Q8NGJ2 320 aa13.79□□□□□ -0.2
TOP3A-202ENST00000461127 OR13D1Q8NGV5 346 aa13.79□□□□□ -0.2
TOP3A-202ENST00000461127 CAPSLQ8WWF8 208 aa13.79□□□□□ -0.2
TOP3A-202ENST00000461127 SDSLQ96GA7 329 aa13.79□□□□□ -0.2
TOP3A-202ENST00000461127 AKR1E2Q96JD6 320 aa13.79□□□□□ -0.2
TOP3A-202ENST00000461127 RNF170Q96K19 258 aa13.79□□□□□ -0.2
TOP3A-202ENST00000461127 MGLLQ99685 303 aa13.79□□□□□ -0.2
TOP3A-202ENST00000461127 ZNF222Q9UK12 451 aa13.79□□□□□ -0.2
TOP3A-202ENST00000461127 BDH1Q02338 343 aa13.78□□□□□ -0.2
TOP3A-202ENST00000461127 PRDX4Q13162 271 aa13.78□□□□□ -0.2
TOP3A-202ENST00000461127 FAM76BQ5HYJ3 339 aa13.78□□□□□ -0.2
TOP3A-202ENST00000461127 ZNF485Q8NCK3 441 aa13.78□□□□□ -0.2
TOP3A-202ENST00000461127 OR5P3Q8WZ94 311 aa13.78□□□□□ -0.2
TOP3A-202ENST00000461127 UFD1Q92890 307 aa13.78□□□□□ -0.2
TOP3A-202ENST00000461127 PELI1Q96FA3 418 aa13.78□□□□□ -0.2
TOP3A-202ENST00000461127 HIST1H2AAQ96QV6 131 aa13.78□□□□□ -0.2
TOP3A-202ENST00000461127 OR10A2Q9H208 303 aa13.78□□□□□ -0.2
TOP3A-202ENST00000461127 ISYNA1Q9NPH2 558 aa13.78□□□□□ -0.2
TOP3A-202ENST00000461127 GTF2A1LQ9UNN4 478 aa13.78□□□□□ -0.2
TOP3A-202ENST00000461127 ZNF850A8MQ14 1090 aa13.77□□□□□ -0.21
TOP3A-202ENST00000461127 RAMP3O60896 148 aa13.77□□□□□ -0.21
TOP3A-202ENST00000461127 TFAP2AP05549 437 aa13.77□□□□□ -0.21
TOP3A-202ENST00000461127 CCL3L1P16619 93 aa13.77□□□□□ -0.21
TOP3A-202ENST00000461127 DCTDP32321 178 aa13.77□□□□□ -0.21
TOP3A-202ENST00000461127 MLLT11Q13015 90 aaPredicted RBP13.77□□□□□ -0.21
TOP3A-202ENST00000461127 CCDC58Q4VC31 144 aa13.77□□□□□ -0.21
TOP3A-202ENST00000461127 SYT6Q5T7P8 510 aaPredicted RBP13.77□□□□□ -0.21
TOP3A-202ENST00000461127 FAM57BQ71RH2 274 aa13.77□□□□□ -0.21
TOP3A-202ENST00000461127 GPR141Q7Z602 305 aa13.77□□□□□ -0.21
TOP3A-202ENST00000461127 CALHM1Q8IU99 346 aa13.77□□□□□ -0.21
TOP3A-202ENST00000461127 Q8NFD4 153 aa13.77□□□□□ -0.21
TOP3A-202ENST00000461127 ZNF671Q8TAW3 534 aa13.77□□□□□ -0.21
TOP3A-202ENST00000461127 RGCCQ9H4X1 137 aa13.77□□□□□ -0.21
TOP3A-202ENST00000461127 R4GMQ9 66 aa13.77□□□□□ -0.21
TOP3A-202ENST00000461127 BIRC6Q9NR09 4857 aa13.76□□□□□ -0.21
TOP3A-202ENST00000461127 TMEM269A0A1B0GVZ9 245 aa13.76□□□□□ -0.21
TOP3A-202ENST00000461127 ODF3BA8MYP8 253 aa13.76□□□□□ -0.21
TOP3A-202ENST00000461127 E9PI62 339 aa13.76□□□□□ -0.21
TOP3A-202ENST00000461127 LOC110117498-PIK3R3F6TDL0 507 aa13.76□□□□□ -0.21
TOP3A-202ENST00000461127 LALBAP00709 142 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms