RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 ZNF281Q9Y2X9 895 aa18.75■□□□□ 0.59
PTPN4-208ENST00000460289 PSPNO60542 156 aa18.74■□□□□ 0.59
PTPN4-208ENST00000460289 MDKP21741 143 aaPredicted RBP18.74■□□□□ 0.59
PTPN4-208ENST00000460289 BMXP51813 675 aa18.74■□□□□ 0.59
PTPN4-208ENST00000460289 RAG2P55895 527 aa18.74■□□□□ 0.59
PTPN4-208ENST00000460289 DLX6P56179 175 aa18.74■□□□□ 0.59
PTPN4-208ENST00000460289 LGALS4P56470 323 aa18.74■□□□□ 0.59
PTPN4-208ENST00000460289 SLC34A1Q06495 639 aa18.74■□□□□ 0.59
PTPN4-208ENST00000460289 ZNF529Q6P280 563 aa18.74■□□□□ 0.59
PTPN4-208ENST00000460289 CRIP3Q6Q6R5 217 aa18.74■□□□□ 0.59
PTPN4-208ENST00000460289 ZNF714Q96N38 554 aa18.74■□□□□ 0.59
PTPN4-208ENST00000460289 CHST6Q9GZX3 395 aa18.74■□□□□ 0.59
PTPN4-208ENST00000460289 PLCXD1Q9NUJ7 323 aa18.74■□□□□ 0.59
PTPN4-208ENST00000460289 FUOMA2VDF0 154 aa18.73■□□□□ 0.59
PTPN4-208ENST00000460289 OR2H2O95918 312 aa18.73■□□□□ 0.59
PTPN4-208ENST00000460289 LMO1P25800 156 aa18.73■□□□□ 0.59
PTPN4-208ENST00000460289 ERP29P30040 261 aaKnown RBP18.73■□□□□ 0.59
PTPN4-208ENST00000460289 ZP1P60852 638 aa18.73■□□□□ 0.59
PTPN4-208ENST00000460289 TAF9Q16594 264 aa18.73■□□□□ 0.59
PTPN4-208ENST00000460289 CHST4Q8NCG5 386 aa18.73■□□□□ 0.59
PTPN4-208ENST00000460289 OR4S1Q8NGB4 309 aa18.73■□□□□ 0.59
PTPN4-208ENST00000460289 OR13D1Q8NGV5 346 aa18.73■□□□□ 0.59
PTPN4-208ENST00000460289 FBLIM1Q8WUP2 373 aa18.73■□□□□ 0.59
PTPN4-208ENST00000460289 TFAP2CQ92754 450 aa18.73■□□□□ 0.59
PTPN4-208ENST00000460289 TMEM106AQ96A25 262 aa18.73■□□□□ 0.59
PTPN4-208ENST00000460289 GPER1Q99527 375 aa18.73■□□□□ 0.59
PTPN4-208ENST00000460289 MEGF9Q9H1U4 602 aa18.73■□□□□ 0.59
PTPN4-208ENST00000460289 VPREB3Q9UKI3 123 aa18.73■□□□□ 0.59
PTPN4-208ENST00000460289 LINC00312Q9Y6C7 94 aa18.73■□□□□ 0.59
PTPN4-208ENST00000460289 SIRT4Q9Y6E7 314 aaPredicted RBP18.73■□□□□ 0.59
PTPN4-208ENST00000460289 SIRPB1O00241 398 aa18.72■□□□□ 0.59
PTPN4-208ENST00000460289 ALDOBP05062 364 aa18.72■□□□□ 0.59
PTPN4-208ENST00000460289 COX7A1P24310 79 aa18.72■□□□□ 0.59
PTPN4-208ENST00000460289 MTNR1BP49286 362 aa18.72■□□□□ 0.59
PTPN4-208ENST00000460289 DMKNQ6E0U4 476 aaPredicted RBP18.72■□□□□ 0.59
PTPN4-208ENST00000460289 ZNF782Q6ZMW2 699 aaPredicted RBP18.72■□□□□ 0.59
PTPN4-208ENST00000460289 SATL1Q86VE3 508 aa18.72■□□□□ 0.59
PTPN4-208ENST00000460289 STX19Q8N4C7 294 aa18.72■□□□□ 0.59
PTPN4-208ENST00000460289 PXT1Q8NFP0 134 aa18.72■□□□□ 0.59
PTPN4-208ENST00000460289 GHSRQ92847 366 aa18.72■□□□□ 0.59
PTPN4-208ENST00000460289 SLITRK2Q9H156 845 aa18.72■□□□□ 0.59
PTPN4-208ENST00000460289 TAS2R4Q9NYW5 299 aa18.72■□□□□ 0.59
PTPN4-208ENST00000460289 PSORS1C1Q9UIG5 152 aa18.72■□□□□ 0.59
PTPN4-208ENST00000460289 XPNPEP2O43895 674 aa18.71■□□□□ 0.59
PTPN4-208ENST00000460289 LALBAP00709 142 aa18.71■□□□□ 0.59
PTPN4-208ENST00000460289 IGHV1-8P0DP01 117 aa18.71■□□□□ 0.59
PTPN4-208ENST00000460289 ZNF44P15621 663 aa18.71■□□□□ 0.59
PTPN4-208ENST00000460289 OR3A1P47881 315 aa18.71■□□□□ 0.59
PTPN4-208ENST00000460289 PPP3R1P63098 170 aa18.71■□□□□ 0.59
PTPN4-208ENST00000460289 RELBQ01201 579 aa18.71■□□□□ 0.59
PTPN4-208ENST00000460289 GABPB1Q06547 395 aaPredicted RBP18.71■□□□□ 0.59
PTPN4-208ENST00000460289 AANATQ16613 207 aa18.71■□□□□ 0.59
PTPN4-208ENST00000460289 ELP2Q6IA86 826 aa18.71■□□□□ 0.59
PTPN4-208ENST00000460289 LAIR2Q6ISS4 152 aa18.71■□□□□ 0.59
PTPN4-208ENST00000460289 TPRX1Q8N7U7 411 aa18.71■□□□□ 0.59
PTPN4-208ENST00000460289 ZNF485Q8NCK3 441 aa18.71■□□□□ 0.59
PTPN4-208ENST00000460289 BPIFB6Q8NFQ5 453 aa18.71■□□□□ 0.59
PTPN4-208ENST00000460289 TMEM138Q9NPI0 162 aa18.71■□□□□ 0.59
PTPN4-208ENST00000460289 NKX1-2Q9UD57 310 aaPredicted RBP18.71■□□□□ 0.59
PTPN4-208ENST00000460289 A0A0G2JK05 382 aa18.7■□□□□ 0.58
PTPN4-208ENST00000460289 MEX3AA1L020 520 aaKnown RBP18.7■□□□□ 0.58
PTPN4-208ENST00000460289 CLPSL1A2RUU4 121 aa18.7■□□□□ 0.58
PTPN4-208ENST00000460289 DEGS1O15121 323 aa18.7■□□□□ 0.58
PTPN4-208ENST00000460289 P2RX3P56373 397 aa18.7■□□□□ 0.58
PTPN4-208ENST00000460289 TAS2R43P59537 309 aa18.7■□□□□ 0.58
PTPN4-208ENST00000460289 SCN1BQ07699 218 aa18.7■□□□□ 0.58
PTPN4-208ENST00000460289 YIF1BQ5BJH7 314 aa18.7■□□□□ 0.58
PTPN4-208ENST00000460289 OR51A2Q8NGJ7 313 aa18.7■□□□□ 0.58
PTPN4-208ENST00000460289 TNFAIP8L1Q8WVP5 186 aa18.7■□□□□ 0.58
PTPN4-208ENST00000460289 C17orf50Q8WW18 174 aa18.7■□□□□ 0.58
PTPN4-208ENST00000460289 AJUBAQ96IF1 538 aa18.7■□□□□ 0.58
PTPN4-208ENST00000460289 SSX3Q99909 188 aa18.7■□□□□ 0.58
PTPN4-208ENST00000460289 UBE2J1Q9Y385 318 aaPredicted RBP18.7■□□□□ 0.58
PTPN4-208ENST00000460289 H0YJX3 145 aa18.69■□□□□ 0.58
PTPN4-208ENST00000460289 GABRPO00591 440 aa18.69■□□□□ 0.58
PTPN4-208ENST00000460289 MYL12BO14950 172 aa18.69■□□□□ 0.58
PTPN4-208ENST00000460289 TGFBR2P37173 567 aa18.69■□□□□ 0.58
PTPN4-208ENST00000460289 OLFML2AQ68BL7 652 aa18.69■□□□□ 0.58
PTPN4-208ENST00000460289 DHRS7BQ6IAN0 325 aaPredicted RBP18.69■□□□□ 0.58
PTPN4-208ENST00000460289 ASPHD2Q6ICH7 369 aa18.69■□□□□ 0.58
PTPN4-208ENST00000460289 Q6P435 159 aa18.69■□□□□ 0.58
PTPN4-208ENST00000460289 AHSA2Q719I0 299 aa18.69■□□□□ 0.58
PTPN4-208ENST00000460289 TCF23Q7RTU1 214 aa18.69■□□□□ 0.58
PTPN4-208ENST00000460289 TRAPPC6BQ86SZ2 158 aa18.69■□□□□ 0.58
PTPN4-208ENST00000460289 OR11H6Q8NGC7 330 aa18.69■□□□□ 0.58
PTPN4-208ENST00000460289 TRBV5-5A0A0J9YX44 114 aa18.68■□□□□ 0.58
PTPN4-208ENST00000460289 H3BUX3 64 aa18.68■□□□□ 0.58
PTPN4-208ENST00000460289 ARG1P05089 322 aa18.68■□□□□ 0.58
PTPN4-208ENST00000460289 CSN2P05814 226 aa18.68■□□□□ 0.58
PTPN4-208ENST00000460289 C21orf33P30042 268 aaPredicted RBP18.68■□□□□ 0.58
PTPN4-208ENST00000460289 RSU1Q15404 277 aa18.68■□□□□ 0.58
PTPN4-208ENST00000460289 LRRC75BQ2VPJ9 315 aa18.68■□□□□ 0.58
PTPN4-208ENST00000460289 Q499Y3 187 aa18.68■□□□□ 0.58
PTPN4-208ENST00000460289 FAM192AQ9GZU8 254 aa18.68■□□□□ 0.58
PTPN4-208ENST00000460289 CKLFQ9UBR5 152 aa18.68■□□□□ 0.58
PTPN4-208ENST00000460289 ERGIC3Q9Y282 383 aa18.68■□□□□ 0.58
PTPN4-208ENST00000460289 TBL2Q9Y4P3 447 aaKnown RBP18.68■□□□□ 0.58
PTPN4-208ENST00000460289 SESN1Q9Y6P5 492 aa18.68■□□□□ 0.58
PTPN4-208ENST00000460289 TRGV10A0A0A0MS01 117 aa18.67■□□□□ 0.58
PTPN4-208ENST00000460289 FAM90A8PA6NJQ4 464 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms