RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 KDM4BO94953 1096 aa18.34■□□□□ 0.53
PTPN4-207ENST00000460162 SNU13P55769 128 aaKnown RBP18.34■□□□□ 0.53
PTPN4-207ENST00000460162 HABP2Q14520 560 aaPredicted RBP18.34■□□□□ 0.53
PTPN4-207ENST00000460162 OR51A4Q8NGJ6 313 aa18.34■□□□□ 0.53
PTPN4-207ENST00000460162 OR13C9Q8NGT0 318 aa18.34■□□□□ 0.53
PTPN4-207ENST00000460162 OR10AC1Q8NH08 325 aa18.34■□□□□ 0.53
PTPN4-207ENST00000460162 NDNFQ8TB73 568 aa18.34■□□□□ 0.53
PTPN4-207ENST00000460162 PELI1Q96FA3 418 aa18.34■□□□□ 0.53
PTPN4-207ENST00000460162 C4orf36Q96KX1 117 aa18.34■□□□□ 0.53
PTPN4-207ENST00000460162 COMMD4Q9H0A8 199 aa18.34■□□□□ 0.53
PTPN4-207ENST00000460162 NEK6Q9HC98 313 aa18.34■□□□□ 0.53
PTPN4-207ENST00000460162 EXOGQ9Y2C4 368 aaKnown RBP18.34■□□□□ 0.53
PTPN4-207ENST00000460162 PLXNB1O43157 2135 aa18.34■□□□□ 0.53
PTPN4-207ENST00000460162 IGKV1-12A0A0C4DH73 117 aa18.33■□□□□ 0.52
PTPN4-207ENST00000460162 FUOMA2VDF0 154 aa18.33■□□□□ 0.52
PTPN4-207ENST00000460162 OR4C45A6NMZ5 311 aa18.33■□□□□ 0.52
PTPN4-207ENST00000460162 SIRPB1O00241 398 aa18.33■□□□□ 0.52
PTPN4-207ENST00000460162 SH2D1BO14796 132 aa18.33■□□□□ 0.52
PTPN4-207ENST00000460162 IGKV1D-12P01611 117 aa18.33■□□□□ 0.52
PTPN4-207ENST00000460162 IL18R1Q13478 541 aa18.33■□□□□ 0.52
PTPN4-207ENST00000460162 ALKBH1Q13686 389 aaKnown RBP18.33■□□□□ 0.52
PTPN4-207ENST00000460162 RFT1Q96AA3 541 aa18.33■□□□□ 0.52
PTPN4-207ENST00000460162 GSTK1Q9Y2Q3 226 aa18.33■□□□□ 0.52
PTPN4-207ENST00000460162 HILPDAQ9Y5L2 63 aa18.33■□□□□ 0.52
PTPN4-207ENST00000460162 TRGV10A0A0A0MS01 117 aa18.32■□□□□ 0.52
PTPN4-207ENST00000460162 J3QLW9 94 aa18.32■□□□□ 0.52
PTPN4-207ENST00000460162 OR2H2O95918 312 aa18.32■□□□□ 0.52
PTPN4-207ENST00000460162 ALDOBP05062 364 aa18.32■□□□□ 0.52
PTPN4-207ENST00000460162 RPSAP08865 295 aaKnown RBP18.32■□□□□ 0.52
PTPN4-207ENST00000460162 CALCBP10092 127 aa18.32■□□□□ 0.52
PTPN4-207ENST00000460162 ZNF19P17023 458 aa18.32■□□□□ 0.52
PTPN4-207ENST00000460162 HTR1DP28221 377 aa18.32■□□□□ 0.52
PTPN4-207ENST00000460162 SLC34A1Q06495 639 aa18.32■□□□□ 0.52
PTPN4-207ENST00000460162 ZIK1Q3SY52 487 aaPredicted RBP18.32■□□□□ 0.52
PTPN4-207ENST00000460162 HIST2H2BDQ6DRA6 164 aa18.32■□□□□ 0.52
PTPN4-207ENST00000460162 OR52W1Q6IF63 320 aa18.32■□□□□ 0.52
PTPN4-207ENST00000460162 SAXO1Q8IYX7 474 aa18.32■□□□□ 0.52
PTPN4-207ENST00000460162 SYS1Q8N2H4 156 aa18.32■□□□□ 0.52
PTPN4-207ENST00000460162 OR4P4Q8NGL7 312 aa18.32■□□□□ 0.52
PTPN4-207ENST00000460162 WIPF2Q8TF74 440 aaPredicted RBP18.32■□□□□ 0.52
PTPN4-207ENST00000460162 LGALS12Q96DT0 336 aa18.32■□□□□ 0.52
PTPN4-207ENST00000460162 ALG8Q9BVK2 526 aa18.32■□□□□ 0.52
PTPN4-207ENST00000460162 CSN2P05814 226 aa18.31■□□□□ 0.52
PTPN4-207ENST00000460162 DBTP11182 482 aaKnown RBP18.31■□□□□ 0.52
PTPN4-207ENST00000460162 GABRB1P18505 474 aa18.31■□□□□ 0.52
PTPN4-207ENST00000460162 LMO1P25800 156 aa18.31■□□□□ 0.52
PTPN4-207ENST00000460162 GALEQ14376 348 aa18.31■□□□□ 0.52
PTPN4-207ENST00000460162 KPNB1Q14974 876 aaKnown RBP18.31■□□□□ 0.52
PTPN4-207ENST00000460162 RTN4RL2Q86UN3 420 aa18.31■□□□□ 0.52
PTPN4-207ENST00000460162 CBR4Q8N4T8 237 aa18.31■□□□□ 0.52
PTPN4-207ENST00000460162 CHST4Q8NCG5 386 aa18.31■□□□□ 0.52
PTPN4-207ENST00000460162 OR5D18Q8NGL1 313 aa18.31■□□□□ 0.52
PTPN4-207ENST00000460162 SPACA5Q96QH8 159 aa18.31■□□□□ 0.52
PTPN4-207ENST00000460162 WNT10AQ9GZT5 417 aa18.31■□□□□ 0.52
PTPN4-207ENST00000460162 ZCCHC4Q9H5U6 513 aa18.31■□□□□ 0.52
PTPN4-207ENST00000460162 TAS2R3Q9NYW6 316 aa18.31■□□□□ 0.52
PTPN4-207ENST00000460162 GMPPBQ9Y5P6 360 aa18.31■□□□□ 0.52
PTPN4-207ENST00000460162 FAM90A22PA8MWA6 464 aa18.3■□□□□ 0.52
PTPN4-207ENST00000460162 H3BUI4 141 aa18.3■□□□□ 0.52
PTPN4-207ENST00000460162 MPZL2O60487 215 aa18.3■□□□□ 0.52
PTPN4-207ENST00000460162 PEX14O75381 377 aa18.3■□□□□ 0.52
PTPN4-207ENST00000460162 JUNBP17275 347 aaPredicted RBP18.3■□□□□ 0.52
PTPN4-207ENST00000460162 MRPL28Q13084 256 aaKnown RBP18.3■□□□□ 0.52
PTPN4-207ENST00000460162 BEAN1Q3B7T3 259 aa18.3■□□□□ 0.52
PTPN4-207ENST00000460162 SAMD5Q5TGI4 173 aa18.3■□□□□ 0.52
PTPN4-207ENST00000460162 HEPN1Q6WQI6 88 aa18.3■□□□□ 0.52
PTPN4-207ENST00000460162 C16orf82Q7Z2V1 217 aa18.3■□□□□ 0.52
PTPN4-207ENST00000460162 NDUFA11Q86Y39 141 aa18.3■□□□□ 0.52
PTPN4-207ENST00000460162 ZNF596Q8TC21 504 aa18.3■□□□□ 0.52
PTPN4-207ENST00000460162 CORO2AQ92828 525 aa18.3■□□□□ 0.52
PTPN4-207ENST00000460162 INPP5EQ9NRR6 644 aa18.3■□□□□ 0.52
PTPN4-207ENST00000460162 G3V4G9 280 aa18.29■□□□□ 0.52
PTPN4-207ENST00000460162 MMP23AO75900 390 aa18.29■□□□□ 0.52
PTPN4-207ENST00000460162 ALX3O95076 343 aa18.29■□□□□ 0.52
PTPN4-207ENST00000460162 ZNF44P15621 663 aa18.29■□□□□ 0.52
PTPN4-207ENST00000460162 ARSJQ5FYB0 599 aaPredicted RBP18.29■□□□□ 0.52
PTPN4-207ENST00000460162 KPRPQ5T749 579 aaPredicted RBP18.29■□□□□ 0.52
PTPN4-207ENST00000460162 PRAMEF5Q5TYX0 476 aa18.29■□□□□ 0.52
PTPN4-207ENST00000460162 DPM3Q9P2X0 92 aa18.29■□□□□ 0.52
PTPN4-207ENST00000460162 TMEM212A6NML5 194 aa18.28■□□□□ 0.52
PTPN4-207ENST00000460162 SULT1B1O43704 296 aa18.28■□□□□ 0.52
PTPN4-207ENST00000460162 FADS2O95864 444 aaKnown RBP18.28■□□□□ 0.52
PTPN4-207ENST00000460162 HCKP08631 526 aa18.28■□□□□ 0.52
PTPN4-207ENST00000460162 CD28P10747 220 aa18.28■□□□□ 0.52
PTPN4-207ENST00000460162 CDK2P24941 298 aa18.28■□□□□ 0.52
PTPN4-207ENST00000460162 CD34P28906 385 aa18.28■□□□□ 0.52
PTPN4-207ENST00000460162 VDAC2P45880 294 aaPredicted RBP18.28■□□□□ 0.52
PTPN4-207ENST00000460162 ARHGDIBP52566 201 aa18.28■□□□□ 0.52
PTPN4-207ENST00000460162 BDH1Q02338 343 aa18.28■□□□□ 0.52
PTPN4-207ENST00000460162 EMX1Q04741 257 aaPredicted RBP18.28■□□□□ 0.52
PTPN4-207ENST00000460162 AESQ08117 197 aa18.28■□□□□ 0.52
PTPN4-207ENST00000460162 NSUN5P1Q3KNT7 163 aa18.28■□□□□ 0.52
PTPN4-207ENST00000460162 RNF144BQ7Z419 303 aa18.28■□□□□ 0.52
PTPN4-207ENST00000460162 LHFPL3Q86UP9 236 aa18.28■□□□□ 0.52
PTPN4-207ENST00000460162 ABHD12Q8N2K0 398 aa18.28■□□□□ 0.52
PTPN4-207ENST00000460162 PARP16Q8N5Y8 322 aa18.28■□□□□ 0.52
PTPN4-207ENST00000460162 AKR1E2Q96JD6 320 aa18.28■□□□□ 0.52
PTPN4-207ENST00000460162 Q96MT0 163 aa18.28■□□□□ 0.52
PTPN4-207ENST00000460162 AASSQ9UDR5 926 aa18.28■□□□□ 0.52
PTPN4-207ENST00000460162 MYRFQ9Y2G1 1151 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms