RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 OR4A4PQ8NGN8 299 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 OR2AE1Q8NHA4 323 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 AKR7LQ8NHP1 331 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 MAFIPQ8WZ33 124 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 SLC39A7Q92504 469 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 PIGCQ92535 297 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 MRPL24Q96A35 216 aaKnown RBP7.65□□□□□ -1.18
HDAC3-202ENST00000459727 REPIN1Q9BWE0 567 aaKnown RBP7.65□□□□□ -1.18
HDAC3-202ENST00000459727 PAPOLGQ9BWT3 736 aaKnown RBP7.65□□□□□ -1.18
HDAC3-202ENST00000459727 TMEM222Q9H0R3 208 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 HRH4Q9H3N8 390 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 ZNF703Q9H7S9 590 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-202ENST00000459727 LRFN1Q9P244 771 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 KLF13Q9Y2Y9 288 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-202ENST00000459727 AMDHD2Q9Y303 409 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 ZNF175Q9Y473 711 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 MPC1Q9Y5U8 109 aa7.65□□□□□ -1.18
HDAC3-202ENST00000459727 RP1P56715 2156 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 DNAH14Q0VDD8 3507 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 IGKV1-27A0A075B6S5 117 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 IGKV1D-8A0A087WSZ0 117 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 C3orf85A0A1B0GTC6 90 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 CLEC18AA5D8T8 446 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 FAM74A7A6NL05 159 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 TRDCB7Z8K6 153 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 TRAPPC2LH3BP13 241 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 MPPED1O15442 326 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 PHF1O43189 567 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-202ENST00000459727 NDUFA2O43678 99 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 PITX3O75364 302 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 OR7C1O76099 320 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-202ENST00000459727 SCGB1D2O95969 90 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 MBPP02686 304 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-202ENST00000459727 SFTA3P0C7M3 94 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 SLC25A6P12236 298 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 NME2P22392 152 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 OPRM1P35372 400 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 MDH2P40926 338 aaKnown RBP7.64□□□□□ -1.19
HDAC3-202ENST00000459727 RFC3P40938 356 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 KCNJ3P48549 501 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 FXYD4P59646 89 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 HFEQ30201 348 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 FAM74A3Q4VXF1 159 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 ZNF468Q5VIY5 522 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-202ENST00000459727 DPPA3Q6W0C5 159 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 DBX2Q6ZNG2 339 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 Q6ZRG5 221 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 SLC25A26Q70HW3 274 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 LDLRAD3Q86YD5 345 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 C1orf210Q8IVY1 113 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 ZNF695Q8IW36 515 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 MCEMP1Q8IX19 187 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 Q8IYB0 196 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 C15orf54Q8N8G6 183 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 CLEC18CQ8NCF0 446 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 OR2M7Q8NG81 312 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 OR4D5Q8NGN0 318 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 ROBO4Q8WZ75 1007 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 EXTL1Q92935 676 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 APH1AQ96BI3 265 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 MSI2Q96DH6 328 aaKnown RBP7.64□□□□□ -1.19
HDAC3-202ENST00000459727 GNPNAT1Q96EK6 184 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-202ENST00000459727 KIRREL1Q96J84 757 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 LOXL4Q96JB6 756 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 TMEM56Q96MV1 263 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 HDHD3Q9BSH5 251 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-202ENST00000459727 PRRG4Q9BZD6 226 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 PKIBQ9C010 78 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 IFT22Q9H7X7 185 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 TUBA4BQ9H853 241 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 BIN3Q9NQY0 253 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 UBE2J1Q9Y385 318 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-202ENST00000459727 KLF2Q9Y5W3 355 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-202ENST00000459727 TMEM56-RWDD3S4R434 201 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 UNC13CQ8NB66 2214 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 MYO9BQ13459 2157 aa7.64□□□□□ -1.19
HDAC3-202ENST00000459727 ZDBF2Q9HCK1 2354 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 PCNX3Q9H6A9 2034 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 IGKV1-12A0A0C4DH73 117 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 ANKRD30BLA7E2S9 258 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 H0Y980 276 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 DEGS1O15121 323 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 SS18L1O75177 396 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-202ENST00000459727 NAPSAO96009 420 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 IGKV1D-12P01611 117 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 HBE1P02100 147 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 IFNA4P05014 189 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 EDN3P14138 238 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 FOLR2P14207 255 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 MUC1P15941 1255 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-202ENST00000459727 ADCYAP1P18509 176 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 VDAC1P21796 283 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 AADACP22760 399 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 ANOS1P23352 680 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 LPAR6P43657 344 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 CAMLGP49069 296 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 HOXA1P49639 335 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-202ENST00000459727 RAB1AP62820 205 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 VAMP2P63027 116 aa7.63□□□□□ -1.19
HDAC3-202ENST00000459727 ZXDAP98168 799 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms