RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 EXOSC4Q9NPD3 245 aaKnown RBP12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 FRRS1LQ9P0K9 344 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 SESN1Q9Y6P5 492 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 IGHV2-26A0A0B4J1V2 119 aa12.71□□□□□ -0.37
CHCHD3-204ENST00000457942 IGKV1-9A0A0C4DH69 117 aa12.71□□□□□ -0.37
CHCHD3-204ENST00000457942 VGLL3A8MV65 326 aa12.71□□□□□ -0.37
CHCHD3-204ENST00000457942 MGST3O14880 152 aa12.71□□□□□ -0.37
CHCHD3-204ENST00000457942 NANOS3P60323 173 aaKnown RBP12.71□□□□□ -0.37
CHCHD3-204ENST00000457942 SNRPGP62308 76 aaKnown RBP12.71□□□□□ -0.37
CHCHD3-204ENST00000457942 HABP2Q14520 560 aaPredicted RBP12.71□□□□□ -0.37
CHCHD3-204ENST00000457942 KPRPQ5T749 579 aaPredicted RBP12.71□□□□□ -0.37
CHCHD3-204ENST00000457942 ZBTB49Q6ZSB9 765 aa12.71□□□□□ -0.37
CHCHD3-204ENST00000457942 LYG1Q8N1E2 194 aa12.71□□□□□ -0.37
CHCHD3-204ENST00000457942 ACBD7Q8N6N7 88 aa12.71□□□□□ -0.37
CHCHD3-204ENST00000457942 OR4S1Q8NGB4 309 aa12.71□□□□□ -0.37
CHCHD3-204ENST00000457942 PIFOQ8TCI5 191 aa12.71□□□□□ -0.37
CHCHD3-204ENST00000457942 SPACA5Q96QH8 159 aa12.71□□□□□ -0.37
CHCHD3-204ENST00000457942 MYCBPQ99417 103 aaPredicted RBP12.71□□□□□ -0.37
CHCHD3-204ENST00000457942 CLEC7AQ9BXN2 247 aa12.71□□□□□ -0.37
CHCHD3-204ENST00000457942 ZNF702PQ9H963 129 aa12.71□□□□□ -0.37
CHCHD3-204ENST00000457942 GMPPBQ9Y5P6 360 aa12.71□□□□□ -0.37
CHCHD3-204ENST00000457942 DNAH3Q8TD57 4116 aa12.71□□□□□ -0.38
CHCHD3-204ENST00000457942 TRGV10A0A0A0MS01 117 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 SH2D1BO14796 132 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 PSPNO60542 156 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 FBXO24O75426 580 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 OPN1MWP04001 364 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 ISG15P05161 165 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 HCKP08631 526 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 OPN1MW2P0DN77 364 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 OPN1MW3P0DN78 364 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 ZNF44P15621 663 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 P2RX3P56373 397 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 SCN1BQ07699 218 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 PDZK1IP1Q13113 114 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 ZNF146Q15072 292 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 NSUN5P1Q3KNT7 163 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 MINOS1Q5TGZ0 78 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 LPCAT4Q643R3 524 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 OR51A4Q8NGJ6 313 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 OR10AC1Q8NH08 325 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 OR5M11Q96RB7 305 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 ALG8Q9BVK2 526 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 CDCA4Q9BXL8 241 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 PRSS22Q9GZN4 317 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 TMEM133Q9H2Q1 129 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 GAL3ST2Q9H3Q3 398 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 HMG20AQ9NP66 347 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 ING3Q9NXR8 418 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 MINOS1-NBL1R4GNA1 71 aa12.7□□□□□ -0.38
CHCHD3-204ENST00000457942 FUOMA2VDF0 154 aa12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 A6NDX4 124 aa12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 H3BUI4 141 aa12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 OR2H2O95918 312 aa12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 OR3A1P47881 315 aa12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 CCR9P51686 369 aa12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 ALKBH1Q13686 389 aaKnown RBP12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 OXLD1Q5BKU9 147 aa12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 KIAA2026Q5HYC2 2103 aa12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 SLC25A30Q5SVS4 291 aa12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 PRAMEF5Q5TYX0 476 aa12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 C11orf87Q6NUJ2 197 aa12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 FDX2Q6P4F2 183 aa12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 CCBE1Q6UXH8 406 aaPredicted RBP12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 REC114Q7Z4M0 266 aa12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 LHFPL3Q86UP9 236 aa12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 TSEN15Q8WW01 171 aaKnown RBP12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 CAPSLQ8WWF8 208 aa12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 SGCDQ92629 289 aa12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 RNF166Q96A37 237 aaPredicted RBP12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 LGALS12Q96DT0 336 aa12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 PELI1Q96FA3 418 aa12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 AURKAIP1Q9NWT8 199 aaPredicted RBP12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 UBE2J1Q9Y385 318 aaPredicted RBP12.69□□□□□ -0.38
CHCHD3-204ENST00000457942 COL7A1Q02388 2944 aa12.68□□□□□ -0.38
CHCHD3-204ENST00000457942 FAM172BPA6NC97 362 aa12.68□□□□□ -0.38
CHCHD3-204ENST00000457942 J3QRE1 110 aa12.68□□□□□ -0.38
CHCHD3-204ENST00000457942 ALDOBP05062 364 aa12.68□□□□□ -0.38
CHCHD3-204ENST00000457942 JUNBP17275 347 aaPredicted RBP12.68□□□□□ -0.38
CHCHD3-204ENST00000457942 HTR1DP28221 377 aa12.68□□□□□ -0.38
CHCHD3-204ENST00000457942 LOXL3P58215 753 aa12.68□□□□□ -0.38
CHCHD3-204ENST00000457942 IL18R1Q13478 541 aa12.68□□□□□ -0.38
CHCHD3-204ENST00000457942 LDLRAD2Q5SZI1 272 aa12.68□□□□□ -0.38
CHCHD3-204ENST00000457942 CFHR4Q92496 578 aa12.68□□□□□ -0.38
CHCHD3-204ENST00000457942 Q96MT0 163 aa12.68□□□□□ -0.38
CHCHD3-204ENST00000457942 COMMD4Q9H0A8 199 aa12.68□□□□□ -0.38
CHCHD3-204ENST00000457942 ZCCHC4Q9H5U6 513 aa12.68□□□□□ -0.38
CHCHD3-204ENST00000457942 SEBOXQ9HB31 216 aaPredicted RBP12.68□□□□□ -0.38
CHCHD3-204ENST00000457942 EXOGQ9Y2C4 368 aaKnown RBP12.68□□□□□ -0.38
CHCHD3-204ENST00000457942 IGKV1-12A0A0C4DH73 117 aa12.67□□□□□ -0.38
CHCHD3-204ENST00000457942 OR4C45A6NMZ5 311 aa12.67□□□□□ -0.38
CHCHD3-204ENST00000457942 MPZL2O60487 215 aa12.67□□□□□ -0.38
CHCHD3-204ENST00000457942 KDM4BO94953 1096 aa12.67□□□□□ -0.38
CHCHD3-204ENST00000457942 IGKV1D-12P01611 117 aa12.67□□□□□ -0.38
CHCHD3-204ENST00000457942 TMEM225BP0DP42 221 aa12.67□□□□□ -0.38
CHCHD3-204ENST00000457942 DBTP11182 482 aaKnown RBP12.67□□□□□ -0.38
CHCHD3-204ENST00000457942 CDK2P24941 298 aa12.67□□□□□ -0.38
CHCHD3-204ENST00000457942 ERP29P30040 261 aaKnown RBP12.67□□□□□ -0.38
CHCHD3-204ENST00000457942 VDAC2P45880 294 aaPredicted RBP12.67□□□□□ -0.38
CHCHD3-204ENST00000457942 ARHGDIBP52566 201 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms