RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 DLX6P56179 175 aa13.21□□□□□ -0.29
CPSF6-203ENST00000456847 RELBQ01201 579 aa13.21□□□□□ -0.29
CPSF6-203ENST00000456847 SCN1BQ07699 218 aa13.21□□□□□ -0.29
CPSF6-203ENST00000456847 OLFML2AQ68BL7 652 aa13.21□□□□□ -0.29
CPSF6-203ENST00000456847 C11orf42Q8N5U0 333 aa13.21□□□□□ -0.29
CPSF6-203ENST00000456847 OR4S1Q8NGB4 309 aa13.21□□□□□ -0.29
CPSF6-203ENST00000456847 OR13D1Q8NGV5 346 aa13.21□□□□□ -0.29
CPSF6-203ENST00000456847 C17orf50Q8WW18 174 aa13.21□□□□□ -0.29
CPSF6-203ENST00000456847 RGP1Q92546 391 aaPredicted RBP13.21□□□□□ -0.29
CPSF6-203ENST00000456847 FAM192AQ9GZU8 254 aa13.21□□□□□ -0.29
CPSF6-203ENST00000456847 RHOFQ9HBH0 211 aa13.21□□□□□ -0.29
CPSF6-203ENST00000456847 TENM1Q9UKZ4 2725 aa13.21□□□□□ -0.29
CPSF6-203ENST00000456847 H3BUX3 64 aa13.21□□□□□ -0.3
CPSF6-203ENST00000456847 CASQ2O14958 399 aaPredicted RBP13.21□□□□□ -0.3
CPSF6-203ENST00000456847 PSPNO60542 156 aa13.21□□□□□ -0.3
CPSF6-203ENST00000456847 ALX3O95076 343 aa13.21□□□□□ -0.3
CPSF6-203ENST00000456847 OR2H2O95918 312 aa13.21□□□□□ -0.3
CPSF6-203ENST00000456847 OR3A1P47881 315 aa13.21□□□□□ -0.3
CPSF6-203ENST00000456847 SSX3Q99909 188 aa13.21□□□□□ -0.3
CPSF6-203ENST00000456847 BABAM2Q9NXR7 383 aa13.21□□□□□ -0.3
CPSF6-203ENST00000456847 CLEC2DQ9UHP7 191 aa13.21□□□□□ -0.3
CPSF6-203ENST00000456847 CLPSL1A2RUU4 121 aa13.2□□□□□ -0.3
CPSF6-203ENST00000456847 EFCAB10A6NFE3 127 aa13.2□□□□□ -0.3
CPSF6-203ENST00000456847 RBP4P02753 201 aa13.2□□□□□ -0.3
CPSF6-203ENST00000456847 ARG1P05089 322 aa13.2□□□□□ -0.3
CPSF6-203ENST00000456847 GNAO1P09471 354 aa13.2□□□□□ -0.3
CPSF6-203ENST00000456847 ZP1P60852 638 aa13.2□□□□□ -0.3
CPSF6-203ENST00000456847 PPP3R1P63098 170 aa13.2□□□□□ -0.3
CPSF6-203ENST00000456847 LRRC75BQ2VPJ9 315 aa13.2□□□□□ -0.3
CPSF6-203ENST00000456847 TCF23Q7RTU1 214 aa13.2□□□□□ -0.3
CPSF6-203ENST00000456847 OR52N1Q8NH53 320 aa13.2□□□□□ -0.3
CPSF6-203ENST00000456847 TNFAIP8L1Q8WVP5 186 aa13.2□□□□□ -0.3
CPSF6-203ENST00000456847 GGHQ92820 318 aa13.2□□□□□ -0.3
CPSF6-203ENST00000456847 TMEM106AQ96A25 262 aa13.2□□□□□ -0.3
CPSF6-203ENST00000456847 SMIM19Q96E16 107 aa13.2□□□□□ -0.3
CPSF6-203ENST00000456847 SLITRK2Q9H156 845 aa13.2□□□□□ -0.3
CPSF6-203ENST00000456847 PPA2Q9H2U2 334 aa13.2□□□□□ -0.3
CPSF6-203ENST00000456847 LINC00312Q9Y6C7 94 aa13.2□□□□□ -0.3
CPSF6-203ENST00000456847 IGHV1-8P0DP01 117 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 P2RX3P56373 397 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 ST3GAL4Q11206 333 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 DYNC1I2Q13409 638 aaKnown RBP13.19□□□□□ -0.3
CPSF6-203ENST00000456847 LY6EQ16553 131 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 OR51A2Q8NGJ7 313 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 RPS4Y2Q8TD47 263 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 DCLRE1BQ9H816 532 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 ZNF281Q9Y2X9 895 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 FUOMA2VDF0 154 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 GABRPO00591 440 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 XPNPEP2O43895 674 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 PAX6P26367 422 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 MTNR1BP49286 362 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 CRIP3Q6Q6R5 217 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 AHSA2Q719I0 299 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 STX19Q8N4C7 294 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 ZFP41Q8N8Y5 198 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 WFDC12Q8WWY7 111 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 NR1H4Q96RI1 486 aaPredicted RBP13.19□□□□□ -0.3
CPSF6-203ENST00000456847 ING3Q9NXR8 418 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 RNF114Q9Y508 228 aa13.19□□□□□ -0.3
CPSF6-203ENST00000456847 SIRT4Q9Y6E7 314 aaPredicted RBP13.19□□□□□ -0.3
CPSF6-203ENST00000456847 MYL12BO14950 172 aa13.18□□□□□ -0.3
CPSF6-203ENST00000456847 OGG1O15527 345 aa13.18□□□□□ -0.3
CPSF6-203ENST00000456847 CLPXO76031 633 aa13.18□□□□□ -0.3
CPSF6-203ENST00000456847 LALBAP00709 142 aa13.18□□□□□ -0.3
CPSF6-203ENST00000456847 RSU1Q15404 277 aa13.18□□□□□ -0.3
CPSF6-203ENST00000456847 PLA1AQ53H76 456 aa13.18□□□□□ -0.3
CPSF6-203ENST00000456847 BRICD5Q6PL45 260 aa13.18□□□□□ -0.3
CPSF6-203ENST00000456847 LHFPL4Q7Z7J7 247 aa13.18□□□□□ -0.3
CPSF6-203ENST00000456847 BPIFB6Q8NFQ5 453 aa13.18□□□□□ -0.3
CPSF6-203ENST00000456847 OR13C5Q8NGS8 318 aa13.18□□□□□ -0.3
CPSF6-203ENST00000456847 CNOT2Q9NZN8 540 aaKnown RBP13.18□□□□□ -0.3
CPSF6-203ENST00000456847 SESN1Q9Y6P5 492 aa13.18□□□□□ -0.3
CPSF6-203ENST00000456847 TRGV10A0A0A0MS01 117 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 PNMA8CA0A1B0GUJ8 204 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 DEGS1O15121 323 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 ERP29P30040 261 aaKnown RBP13.17□□□□□ -0.3
CPSF6-203ENST00000456847 TGFBR2P37173 567 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 DDI2Q5TDH0 399 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 Q6ZSV7 163 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 CHST4Q8NCG5 386 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 PXT1Q8NFP0 134 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 FOXRED1Q96CU9 486 aaPredicted RBP13.17□□□□□ -0.3
CPSF6-203ENST00000456847 NKX3-1Q99801 234 aaPredicted RBP13.17□□□□□ -0.3
CPSF6-203ENST00000456847 MEGF9Q9H1U4 602 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 UBE2J1Q9Y385 318 aaPredicted RBP13.17□□□□□ -0.3
CPSF6-203ENST00000456847 TBL2Q9Y4P3 447 aaKnown RBP13.17□□□□□ -0.3
CPSF6-203ENST00000456847 TAS2R43P59537 309 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 AESQ08117 197 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 ATXN7L3Q14CW9 347 aaPredicted RBP13.17□□□□□ -0.3
CPSF6-203ENST00000456847 ASPHD2Q6ICH7 369 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 ZNF529Q6P280 563 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 OR10K1Q8NGX5 313 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 LINC01006Q8NI28 216 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 GHSRQ92847 366 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 AJUBAQ96IF1 538 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 GAL3ST2Q9H3Q3 398 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 PSORS1C1Q9UIG5 152 aa13.17□□□□□ -0.3
CPSF6-203ENST00000456847 ODF3BA8MYP8 253 aa13.16□□□□□ -0.3
CPSF6-203ENST00000456847 H0YJX3 145 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms