RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 G3V3Y1 287 aa15.3■□□□□ 0.04
PTPN6-204ENST00000456013 DNPH1O43598 174 aa15.3■□□□□ 0.04
PTPN6-204ENST00000456013 ZNF32P17041 273 aa15.3■□□□□ 0.04
PTPN6-204ENST00000456013 SRPXP78539 464 aa15.3■□□□□ 0.04
PTPN6-204ENST00000456013 EXT1Q16394 746 aa15.3■□□□□ 0.04
PTPN6-204ENST00000456013 AKR7LQ8NHP1 331 aa15.3■□□□□ 0.04
PTPN6-204ENST00000456013 PLSCR2Q9NRY7 297 aa15.3■□□□□ 0.04
PTPN6-204ENST00000456013 SLC7A11Q9UPY5 501 aa15.3■□□□□ 0.04
PTPN6-204ENST00000456013 hCG_38984A0A1B0GV85 526 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 GJE1A6NN92 205 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 TRDCB7Z8K6 153 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 MPPED1O15442 326 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 PPYP01298 95 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 ARG1P05089 322 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 OR13C7P0DN81 318 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 EPHA8P29322 1005 aaPredicted RBP15.29■□□□□ 0.04
PTPN6-204ENST00000456013 HTR5AP47898 357 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 SSR4P51571 173 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 RBM11P57052 281 aaKnown RBP15.29■□□□□ 0.04
PTPN6-204ENST00000456013 RAC3P60763 192 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 MEX3BQ6ZN04 569 aaKnown RBP15.29■□□□□ 0.04
PTPN6-204ENST00000456013 FAM185AQ8N0U4 392 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 SPEM1Q8N4L4 309 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 NAXEQ8NCW5 288 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 CPT1CQ8TCG5 803 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 TCEAL3Q969E4 200 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 ZNF700Q9H0M5 742 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 A0A1W2PPE2 198 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 CCDC85CA6NKD9 419 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 CBR3O75828 277 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 COX6A1P12074 109 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 NTF4P34130 210 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 ZNF266Q14584 549 aa15.29■□□□□ 0.04
PTPN6-204ENST00000456013 MED19A0JLT2 244 aaPredicted RBP15.28■□□□□ 0.04
PTPN6-204ENST00000456013 NKX2-6A6NCS4 301 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 FAM24AA6NFZ4 105 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 FABP1P07148 127 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 UMODP07911 640 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 FGF5P12034 268 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 FUT3P21217 361 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 NOVA1P51513 510 aaKnown RBP15.28■□□□□ 0.04
PTPN6-204ENST00000456013 PDCD1Q15116 288 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 ADAM5Q6NVV9 412 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 OR8G5Q8NG78 346 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 M1APQ8TC57 530 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 TMEM222Q9H0R3 208 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 CACNA1EQ15878 2313 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 PITX3O75364 302 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 PATE4P0C8F1 98 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 B4GALT1P15291 398 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 ASCL1P50553 236 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 PSG4Q00888 419 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 ZNF92Q03936 586 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 ZNF565Q8N9K5 539 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 OR14L1PQ8NHC6 308 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 POM121Q96HA1 1249 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 TECTBQ96PL2 329 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 ZNF442Q9H7R0 627 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 GSN-AS1Q9NRJ2 163 aa15.28■□□□□ 0.04
PTPN6-204ENST00000456013 PTRH2Q9Y3E5 179 aaKnown RBP15.28■□□□□ 0.04
PTPN6-204ENST00000456013 OR8U8P0C7N1 319 aa15.27■□□□□ 0.04
PTPN6-204ENST00000456013 ATP6V0CP27449 155 aa15.27■□□□□ 0.04
PTPN6-204ENST00000456013 NKX2-1P43699 371 aaPredicted RBP15.27■□□□□ 0.04
PTPN6-204ENST00000456013 SOHLH1Q5JUK2 328 aa15.27■□□□□ 0.04
PTPN6-204ENST00000456013 PLCXD3Q63HM9 321 aa15.27■□□□□ 0.04
PTPN6-204ENST00000456013 C1QL4Q86Z23 238 aa15.27■□□□□ 0.04
PTPN6-204ENST00000456013 SUMF2Q8NBJ7 301 aa15.27■□□□□ 0.04
PTPN6-204ENST00000456013 OR2G3Q8NGZ4 309 aa15.27■□□□□ 0.04
PTPN6-204ENST00000456013 TMEM56Q96MV1 263 aa15.27■□□□□ 0.04
PTPN6-204ENST00000456013 RARRES2Q99969 163 aa15.27■□□□□ 0.04
PTPN6-204ENST00000456013 TMEM56-RWDD3S4R434 201 aa15.27■□□□□ 0.04
PTPN6-204ENST00000456013 A0A1B0GV50 99 aa15.27■□□□□ 0.03
PTPN6-204ENST00000456013 IGSF23A1L1A6 192 aa15.27■□□□□ 0.03
PTPN6-204ENST00000456013 LINC00587B1AMM8 73 aa15.27■□□□□ 0.03
PTPN6-204ENST00000456013 STARD6P59095 220 aa15.27■□□□□ 0.03
PTPN6-204ENST00000456013 DAZAP2Q15038 168 aaPredicted RBP15.27■□□□□ 0.03
PTPN6-204ENST00000456013 PIGCQ92535 297 aa15.27■□□□□ 0.03
PTPN6-204ENST00000456013 YPEL4Q96NS1 127 aa15.27■□□□□ 0.03
PTPN6-204ENST00000456013 SPIN2AQ99865 258 aa15.27■□□□□ 0.03
PTPN6-204ENST00000456013 SPIN2BQ9BPZ2 258 aa15.27■□□□□ 0.03
PTPN6-204ENST00000456013 OR2H1Q9GZK4 316 aa15.27■□□□□ 0.03
PTPN6-204ENST00000456013 WNT5BQ9H1J7 359 aa15.27■□□□□ 0.03
PTPN6-204ENST00000456013 PLEKHF2Q9H8W4 249 aa15.27■□□□□ 0.03
PTPN6-204ENST00000456013 NIT2Q9NQR4 276 aa15.27■□□□□ 0.03
PTPN6-204ENST00000456013 PI4KAP42356 2102 aa15.26■□□□□ 0.03
PTPN6-204ENST00000456013 ZNF816-ZNF321PA0A0X1KG74 233 aa15.26■□□□□ 0.03
PTPN6-204ENST00000456013 AP4M1O00189 453 aa15.26■□□□□ 0.03
PTPN6-204ENST00000456013 GNRHRP30968 328 aa15.26■□□□□ 0.03
PTPN6-204ENST00000456013 B3GALT5-AS1P59052 145 aa15.26■□□□□ 0.03
PTPN6-204ENST00000456013 IGSF11Q5DX21 431 aa15.26■□□□□ 0.03
PTPN6-204ENST00000456013 Q6ZS49 121 aa15.26■□□□□ 0.03
PTPN6-204ENST00000456013 DPPA2Q7Z7J5 298 aa15.26■□□□□ 0.03
PTPN6-204ENST00000456013 ABHD14BQ96IU4 210 aa15.26■□□□□ 0.03
PTPN6-204ENST00000456013 ALKBH3Q96Q83 286 aaPredicted RBP15.26■□□□□ 0.03
PTPN6-204ENST00000456013 FOXB1Q99853 325 aa15.26■□□□□ 0.03
PTPN6-204ENST00000456013 RBFOX3A6NFN3 312 aa15.26■□□□□ 0.03
PTPN6-204ENST00000456013 ZNF716A6NP11 495 aa15.26■□□□□ 0.03
PTPN6-204ENST00000456013 GDF9O60383 454 aa15.26■□□□□ 0.03
PTPN6-204ENST00000456013 RPS23P62266 143 aaKnown RBP15.26■□□□□ 0.03
PTPN6-204ENST00000456013 POLR2GP62487 172 aaKnown RBP eCLIP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms