RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 LMO1P25800 156 aa14.19□□□□□ -0.14
USP39-208ENST00000455732 BDKRB2P30411 391 aa14.19□□□□□ -0.14
USP39-208ENST00000455732 VHLP40337 213 aa14.19□□□□□ -0.14
USP39-208ENST00000455732 UBE2E1P51965 193 aa14.19□□□□□ -0.14
USP39-208ENST00000455732 MEF2CQ06413 473 aaPredicted RBP14.19□□□□□ -0.14
USP39-208ENST00000455732 ZNF273Q14593 569 aa14.19□□□□□ -0.14
USP39-208ENST00000455732 ASCL4Q6XD76 172 aa14.19□□□□□ -0.14
USP39-208ENST00000455732 GDPD3Q7L5L3 318 aa14.19□□□□□ -0.14
USP39-208ENST00000455732 PIP4P2Q8N4L2 257 aa14.19□□□□□ -0.14
USP39-208ENST00000455732 C11orf42Q8N5U0 333 aa14.19□□□□□ -0.14
USP39-208ENST00000455732 Q8NFD4 153 aa14.19□□□□□ -0.14
USP39-208ENST00000455732 OR4M1Q8NGD0 313 aa14.19□□□□□ -0.14
USP39-208ENST00000455732 PPP1R35Q8TAP8 253 aa14.19□□□□□ -0.14
USP39-208ENST00000455732 TNFAIP8L1Q8WVP5 186 aa14.19□□□□□ -0.14
USP39-208ENST00000455732 SGCDQ92629 289 aa14.19□□□□□ -0.14
USP39-208ENST00000455732 GSTK1Q9Y2Q3 226 aa14.19□□□□□ -0.14
USP39-208ENST00000455732 PNMA8CA0A1B0GUJ8 204 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 MGST3O14880 152 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 OR2H2O95918 312 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 RBP4P02753 201 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 CALCBP10092 127 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 GABRR1P24046 479 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 CRHBPP24387 322 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 EEF1B2P24534 225 aaKnown RBP14.18□□□□□ -0.14
USP39-208ENST00000455732 DUSP1P28562 367 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 ERP29P30040 261 aaKnown RBP14.18□□□□□ -0.14
USP39-208ENST00000455732 OR3A1P47881 315 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 DLX6P56179 175 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 KLRD1Q13241 179 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 SPHARQ15513 63 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 GRK1Q15835 563 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 AWAT1Q58HT5 328 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 DDI2Q5TDH0 399 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 Q6YL49 198 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 LDLRAD3Q86YD5 345 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 PDZD9Q8IXQ8 264 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 TMEM86BQ8N661 226 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 CHST4Q8NCG5 386 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 SLC25A28Q96A46 364 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 DERL3Q96Q80 235 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 OR14A2Q96R54 314 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 GPER1Q99527 375 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 IL36GQ9NZH8 169 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 FOXJ3Q9UPW0 622 aa14.18□□□□□ -0.14
USP39-208ENST00000455732 A0A0U1RQK1 487 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 hCG_1809904A0A1W2PP81 198 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 A0A1W2PPE2 198 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 A0A1W2PR64 198 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 A0A1W2PRV1 198 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 C17orf98A8MV24 154 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 NPFFO15130 113 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 HOXA3O43365 443 aaPredicted RBP14.17□□□□□ -0.14
USP39-208ENST00000455732 RGS10O43665 173 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 CCL3L1P16619 93 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 MAPK3P27361 379 aaPredicted RBP14.17□□□□□ -0.14
USP39-208ENST00000455732 ZNF93P35789 620 aaPredicted RBP14.17□□□□□ -0.14
USP39-208ENST00000455732 PTGFRP43088 359 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 SNU13P55769 128 aaKnown RBP14.17□□□□□ -0.14
USP39-208ENST00000455732 DLX1P56177 255 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 EDDM3BP56851 147 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 HCP5Q6MZN7 132 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 TCF23Q7RTU1 214 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 PRSS48Q7RTY5 328 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 SATL1Q86VE3 508 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 OR4S1Q8NGB4 309 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 OR51T1Q8NGJ9 327 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 ZDHHC16Q969W1 377 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 ORAI1Q96D31 301 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 OR5M11Q96RB7 305 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 SF3B6Q9Y3B4 125 aaKnown RBP14.17□□□□□ -0.14
USP39-208ENST00000455732 POMT1Q9Y6A1 747 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 LINC00312Q9Y6C7 94 aa14.17□□□□□ -0.14
USP39-208ENST00000455732 TRAV8-7A0A075B6U6 113 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 hADV38S2A0JD32 116 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 SIRPB1O00241 398 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 CSN2P05814 226 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 MELTFP08582 738 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 ZNF728P0DKX0 622 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 OR3A4PP47883 348 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 ERVFRD-1P60508 538 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 PRB3Q04118 309 aaPredicted RBP14.16□□□□□ -0.14
USP39-208ENST00000455732 FOXL1Q12952 345 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 GPR50Q13585 617 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 EDDM3AQ14507 147 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 IL13RA2Q14627 380 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 NHLRC3Q5JS37 347 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 RBM48Q5RL73 367 aaKnown RBP14.16□□□□□ -0.14
USP39-208ENST00000455732 Q6P435 159 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 CDH26Q8IXH8 852 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 MS4A15Q8N5U1 240 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 SSMEM1Q8WWF3 244 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 CNBD2Q96M20 576 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 ZNF184Q99676 751 aaPredicted RBP14.16□□□□□ -0.14
USP39-208ENST00000455732 FAM192AQ9GZU8 254 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 CHST6Q9GZX3 395 aa14.16□□□□□ -0.14
USP39-208ENST00000455732 A0A0G2JK05 382 aa14.15□□□□□ -0.14
USP39-208ENST00000455732 MAGEA13PA6NCF6 341 aa14.15□□□□□ -0.14
USP39-208ENST00000455732 SLC33A1O00400 549 aaPredicted RBP14.15□□□□□ -0.14
USP39-208ENST00000455732 PIN1P1O15428 100 aa14.15□□□□□ -0.14
USP39-208ENST00000455732 FBP1P09467 338 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms