RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 VSIG8P0DPA2 414 aa11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 MGMTP16455 207 aa11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 KCNJ3P48549 501 aa11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 DVL1P1P54792 670 aaPredicted RBP11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 OR10A3P58181 314 aa11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 QRFPP83859 136 aa11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 COL10A1Q03692 680 aa11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 Q6P435 159 aa11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 SFXN4Q6P4A7 337 aa11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 GLCCI1Q86VQ1 547 aa11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 NR2C2APQ86WQ0 139 aa11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 NKX3-1Q99801 234 aaPredicted RBP11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 RNF167Q9H6Y7 350 aa11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 ZANQ9Y493 2812 aa11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 CELSR1Q9NYQ6 3014 aa11.88□□□□□ -0.51
HMGXB4-204ENST00000455359 LOC105371242A0A075B767 164 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 LDLRAD4O15165 306 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 NOL3O60936 208 aaKnown RBP11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 OR2H2O95918 312 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 TK1P04183 234 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 GLAP06280 429 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 CALCBP10092 127 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 ZNF44P15621 663 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 ZFP36P26651 326 aaKnown RBP11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 DUSP1P28562 367 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 NCS1P62166 190 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 LSM3P62310 102 aaKnown RBP11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 RPS27AP62979 156 aaKnown RBP11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 IKZF1Q13422 519 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 P2RY14Q15391 338 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 C2orf76Q3KRA6 126 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 HES5Q5TA89 166 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 USP43Q70EL4 1123 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 CLVS1Q8IUQ0 354 aaPredicted RBP11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 OR8H2Q8N162 312 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 ZNRF1Q8ND25 227 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 TMEM104Q8NE00 496 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 TMEM185AQ8NFB2 350 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 TMEM186Q96B77 213 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 Q96M66 194 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 URM1Q9BTM9 101 aaKnown RBP11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 TM2D1Q9BX74 207 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 TMEM59Q9BXS4 323 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 SELENOIQ9C0D9 397 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 IL36RNQ9UBH0 155 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 RAB22AQ9UL26 194 aa11.87□□□□□ -0.51
HMGXB4-204ENST00000455359 A0A0G2JMP0 313 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 A0A0X1KG70 313 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 TMEM82A0PJX8 343 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 FUOMA2VDF0 154 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 J3QLI3 93 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 MGST3O14880 152 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 GEMIN2O14893 280 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 ENSAO43768 121 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 OR7C1O76099 320 aaPredicted RBP11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 MPIG6BO95866 241 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 TGFAP01135 160 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 CSN2P05814 226 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 RAB6AP20340 208 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 ERP29P30040 261 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 RPS19P39019 145 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 SEC61A1P61619 476 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 PAX5Q02548 391 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 MXD1Q05195 221 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 DYNC1I2Q13409 638 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 PIGYQ3MUY2 71 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 C17orf107Q6ZR85 190 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 ASCC1Q8N9N2 400 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 OR4M2Q8NGB6 313 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 OR51D1Q8NGF3 324 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 C8orf46Q8TAG6 207 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 ST8SIA4Q92187 359 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 SLC25A46Q96AG3 418 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 KCTD12Q96CX2 325 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 NCOR1P1Q9H4R4 102 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 LIN7BQ9HAP6 207 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 ABRACLQ9P1F3 81 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 LPAR3Q9UBY5 353 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 DAPK2Q9UIK4 370 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 ABCA1O95477 2261 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 KIR2DS1A0A191URI9 304 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 A0A1W2PP11 408 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 ZNF701M0R085 212 aaPredicted RBP11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 SLC33A1O00400 549 aaPredicted RBP11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 PHF1O43189 567 aaPredicted RBP11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 NDUFB7P17568 137 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 GABRR1P24046 479 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 SERPINB10P48595 397 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 CEBPDP49716 269 aaPredicted RBP11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 SNU13P55769 128 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 VBP1P61758 197 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 LCN2P80188 198 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 PAX2Q02962 417 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 KRTAP1-1Q07627 177 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 UNC119Q13432 240 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 BLMHQ13867 455 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 TAF9Q16594 264 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 BTNL3Q6UXE8 466 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 BTN2A1Q7KYR7 527 aa11.86□□□□□ -0.51
HMGXB4-204ENST00000455359 GDPD3Q7L5L3 318 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms