RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 HOXA5P20719 270 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 GPX4P36969 197 aaPredicted RBP12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 RPS16P62249 146 aaKnown RBP12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 HLA-DRB3P79483 266 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 QRFPP83859 136 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 SPEM2Q0P670 501 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 SMAD4Q13485 552 aaKnown RBP12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 ZNF787Q6DD87 383 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 RNF122Q9H9V4 155 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 BCO1Q9HAY6 547 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 P4HTMQ9NXG6 502 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 WNT16Q9UBV4 365 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 STARD10Q9Y365 291 aa12.12□□□□□ -0.47
UBE2D3-210ENST00000453744 TRGC1P0CF51 173 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 HNRNPKP61978 463 aaKnown RBP eCLIP12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 FBXO46Q6PJ61 603 aaPredicted RBP12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 SLC25A26Q70HW3 274 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 PLEKHF2Q9H8W4 249 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 A0A1W2PQD3 144 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 CXCL1P09341 107 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 IL13RA2Q14627 380 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 KHDC3LQ587J8 217 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 NAT6Q93015 286 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 SHDQ96IW2 340 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 ZNF581Q9P0T4 197 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 CA14Q9ULX7 337 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 NPIPB7O75200 414 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 IGHV2-70P01814 119 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 THBS4P35443 961 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 MRPS21P82921 87 aaKnown RBP12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 Q3ZCU0 254 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 WDR25Q64LD2 544 aaPredicted RBP12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 OR8G2PQ6IF36 304 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 OXGR1Q96P68 337 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 WASF3Q9UPY6 502 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 C3orf85A0A1B0GTC6 90 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 CLPSP04118 112 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 IGHV4-34P06331 123 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 DDTP30046 118 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 MNX1P50219 401 aaPredicted RBP12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 ZNF385CQ66K41 422 aaPredicted RBP12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 GPR179Q6PRD1 2367 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 CCDC54Q8NEL0 328 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 GNRHR2Q96P88 292 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 HIST1H2AAQ96QV6 131 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 LMAN1LQ9HAT1 526 aa12.11□□□□□ -0.47
UBE2D3-210ENST00000453744 CDH23Q9H251 3354 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 TERTO14746 1132 aaKnown RBP12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 CHST1O43916 411 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 ERVS71-1P61550 626 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 SHBQ15464 509 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 ZNF66Q6ZN08 573 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 PP6455Q8WZ26 134 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 MRPL38Q96DV4 380 aaKnown RBP12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 SMIM7Q9BQ49 75 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 DOCK7Q96N67 2140 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 IGHV3-64DA0A0J9YX35 117 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 PMS2P1A4D2B8 440 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 CLDN34H7C241 214 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 NRASP01111 189 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 IFI6P09912 130 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 MPZP25189 248 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 IZUMO4Q1ZYL8 232 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 GNPNAT1Q96EK6 184 aaPredicted RBP12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 WFIKKN1Q96NZ8 548 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 CD300LBA8K4G0 201 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 ZFAND5O76080 213 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 B4GALT1P15291 398 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 TCEAL6Q6IPX3 200 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 OSR2Q8N2R0 312 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 ALKBH3Q96Q83 286 aaPredicted RBP12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 SLC39A9Q9NUM3 307 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 TMED3Q9Y3Q3 217 aa12.1□□□□□ -0.47
UBE2D3-210ENST00000453744 TP53I11O14683 189 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 BMP5P22003 454 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 LHFPL1Q86WI0 220 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 DMBX1Q8NFW5 382 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 A0A1W2PPC4 97 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 PPP5D1E7EU14 171 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 DHHO43323 396 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 IFNA1P01562 189 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 SSTP61278 116 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 HEPN1Q6WQI6 88 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 TMEM252Q8N6L7 170 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 ZNF665Q9H7R5 613 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 ZNF407Q9C0G0 2248 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 EML5Q05BV3 1969 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 H7BYZ3 331 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 HIST1H2BKO60814 126 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 SRSF10O75494 262 aaKnown RBP12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 HIST1H2BJP06899 126 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 HIST1H2BOP23527 126 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 HIST1H2BBP33778 126 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 HIST1H2BDP58876 126 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 HIST1H2BCP62807 126 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 TMEM187Q14656 261 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 HIST2H2BEQ16778 126 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 SPANXN5Q5MJ07 72 aa12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.09□□□□□ -0.47
UBE2D3-210ENST00000453744 CST9LP1Q5W188 147 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms