RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 ZNF225Q9UK10 706 aa3.27□□□□□ -1.89
LINC00393-202ENST00000452852 FIS1Q9Y3D6 152 aa3.27□□□□□ -1.89
LINC00393-202ENST00000452852 ZNF337Q9Y3M9 751 aa3.27□□□□□ -1.89
LINC00393-202ENST00000452852 POLR3HQ9Y535 204 aaPredicted RBP3.27□□□□□ -1.89
LINC00393-202ENST00000452852 CHD3Q12873 2000 aaKnown RBP3.27□□□□□ -1.89
LINC00393-202ENST00000452852 CCDC168Q8NDH2 2452 aa3.27□□□□□ -1.89
LINC00393-202ENST00000452852 MED12Q93074 2177 aa3.27□□□□□ -1.89
LINC00393-202ENST00000452852 NF1P21359 2839 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 IGLV3-32A0A0A0MS00 114 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 A0A0J9YWU9 116 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 A0A1W2PPR1 153 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 SMIM23A6NLE4 172 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 C17orf51A8MQB3 221 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 TMEM114B3SHH9 223 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 K7N7A8 449 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 COPEO14579 308 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 TNFSF11O14788 317 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 SS18L1O75177 396 aaPredicted RBP3.26□□□□□ -1.89
LINC00393-202ENST00000452852 AQP8O94778 261 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 LY6G6DO95868 133 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 KRT16P08779 473 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 IFI6P09912 130 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 NEFHP12036 1026 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 SRMP19623 302 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 SLC2A5P22732 501 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 IL32P24001 234 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 STOMP27105 288 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 CD1BP29016 333 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 AQP1P29972 269 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 LCN1P31025 176 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 RRM2P31350 389 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 EIF1P41567 113 aaKnown RBP3.26□□□□□ -1.89
LINC00393-202ENST00000452852 FOXA1P55317 472 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 ATP5J2P56134 94 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 DNAJB13P59910 316 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 RPL38P63173 70 aaKnown RBP3.26□□□□□ -1.89
LINC00393-202ENST00000452852 DMTNQ08495 405 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 ARL6IP1Q15041 203 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 AANATQ16613 207 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 KRT71Q3SY84 523 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 GLIPR1L2Q4G1C9 344 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 HBMQ6B0K9 141 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 C22orf42Q6IC83 251 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 FAM71E1Q6IPT2 247 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 REEP3Q6NUK4 255 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 GATSQ8NAP1 163 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 OR10D3Q8NH80 312 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 OR2V1Q8NHB1 315 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 GPX8Q8TED1 209 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 RNF138Q8WVD3 245 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 GIMAP1Q8WWP7 306 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 CPNE4Q96A23 557 aaPredicted RBP3.26□□□□□ -1.89
LINC00393-202ENST00000452852 CIDECQ96AQ7 238 aaPredicted RBP3.26□□□□□ -1.89
LINC00393-202ENST00000452852 RNF145Q96MT1 663 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 TRIM15Q9C019 465 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 RGCCQ9H4X1 137 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 LRTM1Q9HBL6 345 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 EML4Q9HC35 981 aaKnown RBP3.26□□□□□ -1.89
LINC00393-202ENST00000452852 FGF20Q9NP95 211 aaPredicted RBP3.26□□□□□ -1.89
LINC00393-202ENST00000452852 C1orf109Q9NX04 203 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 TAS2R7Q9NYW3 318 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 MTCH1Q9NZJ7 389 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 ANK3Q12955 4377 aaKnown RBP3.26□□□□□ -1.89
LINC00393-202ENST00000452852 CUBNO60494 3623 aa3.26□□□□□ -1.89
LINC00393-202ENST00000452852 ANKHD1Q8IWZ3 2542 aaKnown RBP3.25□□□□□ -1.89
LINC00393-202ENST00000452852 ABCA4P78363 2273 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 KIR2DL5BA0A0G2JN68 375 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 KIR2DL5BA0A0G2JPC4 375 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 A0A1W2PP18 115 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 LOC110117498-PIK3R3F6TDL0 507 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 UBFD1O14562 309 aaKnown RBP3.25□□□□□ -1.89
LINC00393-202ENST00000452852 AZIN1O14977 448 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 KCNK2O95069 426 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 PSMG1O95456 288 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 IGHV3-13P01766 116 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 S100A9P06702 114 aaKnown RBP3.25□□□□□ -1.89
LINC00393-202ENST00000452852 LINC00032P0C843 101 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 GATA1P15976 413 aaPredicted RBP3.25□□□□□ -1.89
LINC00393-202ENST00000452852 PSMB1P20618 241 aaKnown RBP3.25□□□□□ -1.89
LINC00393-202ENST00000452852 ELK4P28324 431 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 AGTR1P30556 359 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 NAA10P41227 235 aaPredicted RBP3.25□□□□□ -1.89
LINC00393-202ENST00000452852 PAX5Q02548 391 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 CD47Q08722 323 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 GUSBP1Q15486 140 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 STK11Q15831 433 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 CLEC12BQ2HXU8 276 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 PLPPR5Q32ZL2 321 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 ATP6AP1LQ52LC2 224 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 PAN3Q58A45 887 aaKnown RBP3.25□□□□□ -1.89
LINC00393-202ENST00000452852 CPTPQ5TA50 214 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 C9orf135Q5VTT2 229 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 AADACL4Q5VUY2 407 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 CLEC6AQ6EIG7 209 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 ANKRD26P1Q6NSI1 321 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 FAAP20Q6NZ36 180 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 C1orf94Q6P1W5 598 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 Q6ZN92 141 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 DNM1P46Q6ZS02 220 aa3.25□□□□□ -1.89
LINC00393-202ENST00000452852 SSX8Q7RTT4 187 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms