RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 OR5D13Q8NGL4 314 aa11.82□□□□□ -0.52
COL3A1-203ENST00000450867 TBC1D15Q8TC07 691 aa11.82□□□□□ -0.52
COL3A1-203ENST00000450867 H1FXQ92522 213 aaKnown RBP11.82□□□□□ -0.52
COL3A1-203ENST00000450867 UQCC2Q9BRT2 126 aa11.82□□□□□ -0.52
COL3A1-203ENST00000450867 ELL3Q9HB65 397 aaPredicted RBP11.82□□□□□ -0.52
COL3A1-203ENST00000450867 EXOSC4Q9NPD3 245 aaKnown RBP11.82□□□□□ -0.52
COL3A1-203ENST00000450867 GLS2Q9UI32 602 aa11.82□□□□□ -0.52
COL3A1-203ENST00000450867 A0A0A6YYJ9 748 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 SH2D1BO14796 132 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 PSPNO60542 156 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 RGS9O75916 674 aaPredicted RBP11.81□□□□□ -0.52
COL3A1-203ENST00000450867 TOX4O94842 621 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 OR2H2O95918 312 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 CSN2P05814 226 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 SRMP19623 302 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 DUSP1P28562 367 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 ERP29P30040 261 aaKnown RBP11.81□□□□□ -0.52
COL3A1-203ENST00000450867 OR3A1P47881 315 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 CAPZA1P52907 286 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 ARF6P62330 175 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 RPL31P62899 125 aaKnown RBP11.81□□□□□ -0.52
COL3A1-203ENST00000450867 PAX5Q02548 391 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 PDCD1Q15116 288 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 RSU1Q15404 277 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 HSD17B12Q53GQ0 312 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 C1orf100Q5SVJ3 147 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 USP43Q70EL4 1123 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 CMTM4Q8IZR5 234 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 ASCC1Q8N9N2 400 aaKnown RBP11.81□□□□□ -0.52
COL3A1-203ENST00000450867 METTL9Q9H1A3 318 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 IFT22Q9H7X7 185 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 C19orf12Q9NSK7 152 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 GSTK1Q9Y2Q3 226 aa11.81□□□□□ -0.52
COL3A1-203ENST00000450867 TRAV40A0A0B4J280 105 aa11.8□□□□□ -0.52
COL3A1-203ENST00000450867 MGST3O14880 152 aa11.8□□□□□ -0.52
COL3A1-203ENST00000450867 ARL6IP5O75915 188 aa11.8□□□□□ -0.52
COL3A1-203ENST00000450867 CDRT1O95170 752 aa11.8□□□□□ -0.52
COL3A1-203ENST00000450867 MAS1P04201 325 aa11.8□□□□□ -0.52
COL3A1-203ENST00000450867 IGHV4-38-2P0DP08 117 aa11.8□□□□□ -0.52
COL3A1-203ENST00000450867 FABP5Q01469 135 aa11.8□□□□□ -0.52
COL3A1-203ENST00000450867 MEF2CQ06413 473 aaPredicted RBP11.8□□□□□ -0.52
COL3A1-203ENST00000450867 GPR176Q14439 515 aa11.8□□□□□ -0.52
COL3A1-203ENST00000450867 TMEM200BQ69YZ2 307 aa11.8□□□□□ -0.52
COL3A1-203ENST00000450867 LINC00596Q86U02 117 aa11.8□□□□□ -0.52
COL3A1-203ENST00000450867 JAGN1Q8N5M9 183 aa11.8□□□□□ -0.52
COL3A1-203ENST00000450867 TNFRSF14Q92956 283 aa11.8□□□□□ -0.52
COL3A1-203ENST00000450867 TMEM203Q969S6 136 aa11.8□□□□□ -0.52
COL3A1-203ENST00000450867 FOXRED1Q96CU9 486 aaPredicted RBP11.8□□□□□ -0.52
COL3A1-203ENST00000450867 MRPS24Q96EL2 167 aaKnown RBP11.8□□□□□ -0.52
COL3A1-203ENST00000450867 NKX3-1Q99801 234 aaPredicted RBP11.8□□□□□ -0.52
COL3A1-203ENST00000450867 FAM192AQ9GZU8 254 aa11.8□□□□□ -0.52
COL3A1-203ENST00000450867 TCF7L1Q9HCS4 588 aa11.8□□□□□ -0.52
COL3A1-203ENST00000450867 PCDHB16Q9NRJ7 776 aa11.8□□□□□ -0.52
COL3A1-203ENST00000450867 A0A0G2JK05 382 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 CENPVL3A0A0U1RRI6 287 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 TRDV1A0A1B0GX56 115 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 SLC33A1O00400 549 aaPredicted RBP11.79□□□□□ -0.52
COL3A1-203ENST00000450867 CCRL2O00421 344 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 RBP4P02753 201 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 CALCBP10092 127 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 PRTN3P24158 256 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 DLX6P56179 175 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 RBM11P57052 281 aaKnown RBP11.79□□□□□ -0.52
COL3A1-203ENST00000450867 SYT6Q5T7P8 510 aaPredicted RBP11.79□□□□□ -0.52
COL3A1-203ENST00000450867 GDPD3Q7L5L3 318 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 VMO1Q7Z5L0 202 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 OSR2Q8N2R0 312 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 C11orf42Q8N5U0 333 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 OR4S1Q8NGB4 309 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 OR4D6Q8NGJ1 314 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 OR10K1Q8NGX5 313 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 PPP1R35Q8TAP8 253 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 MUL1Q969V5 352 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 S100A13Q99584 98 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 PCGF1Q9BSM1 259 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 PRDM13Q9H4Q3 707 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 METTL8Q9H825 291 aaKnown RBP11.79□□□□□ -0.52
COL3A1-203ENST00000450867 ONECUT1Q9UBC0 465 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 GHRLQ9UBU3 117 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 ZNF69Q9UC07 566 aa11.79□□□□□ -0.52
COL3A1-203ENST00000450867 MRPS28Q9Y2Q9 187 aaKnown RBP11.79□□□□□ -0.52
COL3A1-203ENST00000450867 A0A1W2PPH5 198 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 A0A1W2PQ09 198 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 TRIM64CA6NLI5 447 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 C17orf98A8MV24 154 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 SIRPB1O00241 398 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 HTR3BO95264 441 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 TNFAIP8O95379 198 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 UBBP0CG47 229 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 GABRR1P24046 479 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 FPR2P25090 351 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 SNU13P55769 128 aaKnown RBP11.78□□□□□ -0.52
COL3A1-203ENST00000450867 P2RX3P56373 397 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 ZNF273Q14593 569 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 GRK1Q15835 563 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 GPR157Q5UAW9 335 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 GLT8D1Q68CQ7 371 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 TCF23Q7RTU1 214 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 FAM185AQ8N0U4 392 aa11.78□□□□□ -0.52
COL3A1-203ENST00000450867 GFI1Q99684 422 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms