RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 MKXQ8IYA7 352 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SELENOHQ8IZQ5 122 aaKnown RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 OR52E1Q8NGJ3 308 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 ACER1Q8TDN7 264 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 TMEM255BQ8WV15 326 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 RTN4IP1Q8WWV3 396 aaPredicted RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 RAX2Q96IS3 184 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SUSD3Q96L08 255 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 HARBI1Q96MB7 349 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SMOQ99835 787 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 ULBP3Q9BZM4 244 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 GCM1Q9NP62 436 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 TMEM38BQ9NVV0 291 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 IL17CQ9P0M4 197 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 CACNG4Q9UBN1 327 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 ST6GALNAC2Q9UJ37 374 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 TIMM8BQ9Y5J9 83 aaPredicted RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 KAT6AQ92794 2004 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 LOC285556D6RIA3 1793 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 TRAV1-1A0A0B4J248 108 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 A1L4Q6 167 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 FAM221AA4D161 298 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 NCBP2LA6PVI3 153 aaKnown RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 C4orf47A7E2U8 309 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SNURFLB1AK76 121 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 RAB29O14966 203 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 TMPRSS11DO60235 418 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 FGF17O60258 216 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 IL6RP08887 468 aaPredicted RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 SCGB1C2P0DMR2 95 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 CD22P20273 847 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 BCL3P20749 454 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 WNT5AP41221 380 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 KIR2DL2P43627 348 aaPredicted RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 FLT3LGP49771 235 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 CSRP3P50461 194 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 RAB9AP51151 201 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 RPS26P62854 115 aaKnown RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 ZXDBP98169 803 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 MEF2BQ02080 365 aaPredicted RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 SLC38A11Q08AI6 406 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 RIGQ13278 110 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 MRPL49Q13405 166 aaKnown RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 EIF4EBP2Q13542 120 aaPredicted RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 ACSF3Q4G176 576 aaPredicted RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 LCE2AQ5TA79 106 aaPredicted RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 TCTN3Q6NUS6 607 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 MORN3Q6PF18 240 aaPredicted RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 ZNF595Q8IYB9 648 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 OR5C1Q8NGR4 320 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 ERGIC1Q969X5 290 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 THOC3Q96J01 351 aaKnown RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 NMNAT3Q96T66 252 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SDF2Q99470 211 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 RTL8AQ9BWD3 113 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SNHG12Q9BXW3 62 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 PRDM13Q9H4Q3 707 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 IKZF5Q9H5V7 419 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 GEMIN7Q9H840 131 aaKnown RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 GPR35Q9HC97 309 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 LTB4R2Q9NPC1 389 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 FGF21Q9NSA1 209 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 OSER1Q9NX31 292 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 FLRT3Q9NZU0 649 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 CES1P1Q9UKY3 287 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 HSF4Q9ULV5 492 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 ENTPD2Q9Y5L3 495 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 A0A0G2JMZ2 1700 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 LRRC37A2A6NM11 1700 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 LRRC37AA6NMS7 1700 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 hADV38S2A0JD32 116 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 ZC3H12DA2A288 527 aaKnown RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 HELTA6NFD8 242 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 DDTLA6NHG4 134 aaPredicted RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 SLC38A8A6NNN8 435 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 ZNF732B4DXR9 585 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 FAM90A26D6RGX4 464 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 FAM72CH0Y354 149 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 CORTO00230 105 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SPINT1O43278 529 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 ZNF217O75362 1048 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 ZNF205O95201 554 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 TIAF1O95411 115 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 APBA3O96018 575 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 HMGN2P05204 90 aaKnown RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 IFI6P09912 130 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SLC35E2P0CK97 266 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SMIM10L2AP0DMW4 78 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SMIM10L2BP0DMW5 78 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 GZMBP10144 247 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 SLC25A6P12236 298 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 PNLIPP16233 465 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 KLRK1P26718 216 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 GPR183P32249 361 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 LIM2P55344 173 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 MGAT2Q10469 447 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 IGFBP7Q16270 282 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 CCSMST1Q4G0I0 132 aa1.96□□□□□ -2.1
USP53-202ENST00000450251 MRPL2Q5T653 305 aaKnown RBP1.96□□□□□ -2.1
USP53-202ENST00000450251 FAM72AQ5TYM5 149 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms