RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 FAM90A15PP0C7V4 464 aa13.78□□□□□ -0.2
AP000253.1-201ENST00000449339 FAM90A13PP0C7W8 464 aa13.78□□□□□ -0.2
AP000253.1-201ENST00000449339 FAM90A14PP0C7W9 464 aa13.78□□□□□ -0.2
AP000253.1-201ENST00000449339 FAM90A24PP0C7X0 464 aa13.78□□□□□ -0.2
AP000253.1-201ENST00000449339 PMELP40967 661 aa13.78□□□□□ -0.2
AP000253.1-201ENST00000449339 FGF12P61328 243 aa13.78□□□□□ -0.2
AP000253.1-201ENST00000449339 CYCSP99999 105 aaKnown RBP13.78□□□□□ -0.2
AP000253.1-201ENST00000449339 ZNF345Q14585 488 aa13.78□□□□□ -0.2
AP000253.1-201ENST00000449339 IGFBP7Q16270 282 aa13.78□□□□□ -0.2
AP000253.1-201ENST00000449339 TBC1D28Q2M2D7 210 aa13.78□□□□□ -0.2
AP000253.1-201ENST00000449339 OR2A2Q6IF42 318 aa13.78□□□□□ -0.2
AP000253.1-201ENST00000449339 SLC22A25Q6T423 547 aa13.78□□□□□ -0.2
AP000253.1-201ENST00000449339 DHRS11Q6UWP2 260 aa13.78□□□□□ -0.2
AP000253.1-201ENST00000449339 OR5P3Q8WZ94 311 aa13.78□□□□□ -0.2
AP000253.1-201ENST00000449339 NMES1Q9C002 83 aa13.78□□□□□ -0.2
AP000253.1-201ENST00000449339 CHMP1AQ9HD42 196 aaPredicted RBP13.78□□□□□ -0.2
AP000253.1-201ENST00000449339 ZNF71Q9NQZ8 489 aaPredicted RBP13.78□□□□□ -0.2
AP000253.1-201ENST00000449339 FAM215AQ9Y5M1 114 aa13.78□□□□□ -0.2
AP000253.1-201ENST00000449339 OR2F2O95006 317 aa13.77□□□□□ -0.21
AP000253.1-201ENST00000449339 PSMB6P28072 239 aa13.77□□□□□ -0.21
AP000253.1-201ENST00000449339 OR2F1Q13607 317 aa13.77□□□□□ -0.21
AP000253.1-201ENST00000449339 ESPL1Q14674 2120 aa13.77□□□□□ -0.21
AP000253.1-201ENST00000449339 TMEM211Q6ICI0 200 aa13.77□□□□□ -0.21
AP000253.1-201ENST00000449339 SLC51BQ86UW2 128 aa13.77□□□□□ -0.21
AP000253.1-201ENST00000449339 CXorf67Q86X51 503 aaPredicted RBP13.77□□□□□ -0.21
AP000253.1-201ENST00000449339 MKXQ8IYA7 352 aa13.77□□□□□ -0.21
AP000253.1-201ENST00000449339 MARS2Q96GW9 593 aaKnown RBP13.77□□□□□ -0.21
AP000253.1-201ENST00000449339 HS3ST6Q96QI5 342 aa13.77□□□□□ -0.21
AP000253.1-201ENST00000449339 ZNF286AQ9HBT8 521 aa13.77□□□□□ -0.21
AP000253.1-201ENST00000449339 PLSCR4Q9NRQ2 329 aa13.77□□□□□ -0.21
AP000253.1-201ENST00000449339 MPC1Q9Y5U8 109 aa13.77□□□□□ -0.21
AP000253.1-201ENST00000449339 PTPRQQ9UMZ3 2332 aa13.77□□□□□ -0.21
AP000253.1-201ENST00000449339 RNF222A6NCQ9 220 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 TUBAL3A6NHL2 446 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 TRAPPC2LH3BP13 241 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 ZNF205O95201 554 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 SPDEFO95238 335 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 CRYABP02511 175 aaKnown RBP13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 CTSDP07339 412 aaPredicted RBP13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 COX5AP20674 150 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 PTGER4P35408 488 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 ERVS71-1P61550 626 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 TBR1Q16650 682 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 OR2T2Q6IF00 324 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 Q6ZPA2 131 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 KCNRGQ8N5I3 272 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 WDR31Q8NA23 367 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 SCARB1Q8WTV0 552 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 MBD2Q9UBB5 411 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 IGF2RP11717 2491 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 MBD3L4A6NDZ8 208 aaPredicted RBP13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 MBD3L3A6NE82 208 aaPredicted RBP13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 MBD3L5A6NJ08 208 aaPredicted RBP13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 MPTX1A8MV57 137 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 CGAP01215 116 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 IFNA2P01563 188 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 HAGHLQ6PII5 290 aaPredicted RBP13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 ACOT7LQ6ZUV0 252 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 MBD3L2Q8NHZ7 208 aaPredicted RBP13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 PROCRQ9UNN8 238 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 MSRB2Q9Y3D2 182 aa13.76□□□□□ -0.21
AP000253.1-201ENST00000449339 PRSS44E7EML9 344 aa13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 SYNGR1O43759 233 aa13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 MRPL49Q13405 166 aaKnown RBP13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 SGPP2Q8IWX5 399 aa13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 CCDC36Q8IYA8 594 aa13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 TOMM40LQ969M1 308 aa13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 VRK1Q99986 396 aaPredicted RBP13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 DHRS9Q9BPW9 319 aa13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 WDR13Q9H1Z4 485 aa13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 METTL8Q9H825 291 aaKnown RBP13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 CDH20Q9HBT6 801 aa13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 IL36RNQ9UBH0 155 aa13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 KIF25Q9UIL4 384 aa13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 OR5B21A6NL26 309 aa13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 J3QW42 95 aa13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 CNOT4O95628 575 aaKnown RBP13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 CA6P23280 308 aa13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 CALCRP30988 508 aa13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 GNG3P63215 75 aa13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 BEX5Q5H9J7 111 aa13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 COMMD7Q86VX2 200 aa13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 ZNF573Q86YE8 665 aa13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 INO80EQ8NBZ0 244 aaPredicted RBP13.75□□□□□ -0.21
AP000253.1-201ENST00000449339 KANTRA0A1W2PQU2 76 aa13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 K7ENP7 123 aa13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 SMPD2O60906 423 aa13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 WDR1O75083 606 aa13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 ZNF728P0DKX0 622 aa13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 RRASP10301 218 aa13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 FCGR2CP31995 323 aa13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 RBMXP38159 391 aaKnown RBP13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 INO80CQ6PI98 192 aaPredicted RBP13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 FAM180AQ6UWF9 173 aa13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 OR2J1Q9GZK6 312 aa13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 TEX13DA0A0J9YY54 714 aaPredicted RBP13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 CRYM-AS1A6NIL9 109 aa13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 C3orf80F5H4A9 247 aa13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 PIGPP57054 158 aa13.74□□□□□ -0.21
AP000253.1-201ENST00000449339 FXYD4P59646 89 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms