RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 C6orf120Q7Z4R8 191 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 GALNT10Q86SR1 603 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 ZNF329Q86UD4 541 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 NT5DC3Q86UY8 548 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 LINC00337Q8N6G1 96 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 DCAF4L2Q8NA75 395 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 GPR32P1Q8NGA4 272 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 OR4M1Q8NGD0 313 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 OR6K3Q8NGY3 331 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 SLC37A2Q8TED4 501 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 RDH5Q92781 318 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 FAM104AQ969W3 186 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 CHAC1Q9BUX1 264 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 TIPINQ9BVW5 301 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 CHST5Q9GZS9 411 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 ASB7Q9H672 318 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 PSG11Q9UQ72 335 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 PRSS21Q9Y6M0 314 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 VWA8A3KMH1 1905 aa2.72□□□□□ -1.97
PMS1-216ENST00000447734 TRAV8-3A0A0A6YYJ7 113 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 TGIF2-C20orf24A0A0A6YYL0 155 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 CCL15-CCL14A0A0B4J2E2 113 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 C8orf87E5RJ46 101 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 PGRMC1O00264 195 aaKnown RBP2.71□□□□□ -1.98
PMS1-216ENST00000447734 KPNA3O00505 521 aaPredicted RBP2.71□□□□□ -1.98
PMS1-216ENST00000447734 MFNGO00587 321 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 TRAF3IP2O43734 574 aaPredicted RBP2.71□□□□□ -1.98
PMS1-216ENST00000447734 CA11O75493 328 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 ARL6IP5O75915 188 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 OR2A4O95047 310 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 CA2P00918 260 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 SERPINA1P01009 418 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 IGHV4-34P06331 123 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 RPSAP08865 295 aaKnown RBP2.71□□□□□ -1.98
PMS1-216ENST00000447734 OR4Q2P0C623 313 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 LINC00614P0C842 121 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 MYL12AP19105 171 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 IL3RAP26951 378 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 KIR3DL2P43630 455 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 SULT1A1P50225 295 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 SULT1A2P50226 295 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 ZNF136P52737 540 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 RAB14P61106 215 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 PPP1CAP62136 330 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 POLR2GP62487 172 aaKnown RBP eCLIP2.71□□□□□ -1.98
PMS1-216ENST00000447734 C1DQ13901 141 aaKnown RBP2.71□□□□□ -1.98
PMS1-216ENST00000447734 CCL15Q16663 113 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 ZNF658BQ4V348 819 aaPredicted RBP2.71□□□□□ -1.98
PMS1-216ENST00000447734 C14orf177Q52M58 125 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 SMUG1Q53HV7 270 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 MPV17L2Q567V2 206 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 UBE2NLQ5JXB2 153 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 C9orf129Q5T035 196 aaKnown RBP2.71□□□□□ -1.98
PMS1-216ENST00000447734 C1orf195Q5TG92 126 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 FBXL22Q6P050 247 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 NIT1Q86X76 327 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 GID4Q8IVV7 300 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 RIMKLAQ8IXN7 391 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 UBALD2Q8IYN6 164 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 ZNF645Q8N7E2 425 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 DTD1Q8TEA8 209 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 AP3S1Q92572 193 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 IMP4Q96G21 291 aaKnown RBP2.71□□□□□ -1.98
PMS1-216ENST00000447734 CEP19Q96LK0 163 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 OR2A7Q96R45 310 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 LINC01587Q99440 93 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 DOK1Q99704 481 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 MRPL40Q9NQ50 206 aaKnown RBP2.71□□□□□ -1.98
PMS1-216ENST00000447734 PARP11Q9NR21 331 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 RBM12B-AS1Q9P1G2 102 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 LSM5Q9Y4Y9 91 aaKnown RBP2.71□□□□□ -1.98
PMS1-216ENST00000447734 WSB1Q9Y6I7 421 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 V9GYQ6 96 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 A0A1W2PP64 1363 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 SNAPC4Q5SXM2 1469 aa2.71□□□□□ -1.98
PMS1-216ENST00000447734 MN1Q10571 1320 aaPredicted RBP2.7□□□□□ -1.98
PMS1-216ENST00000447734 SCN2AQ99250 2005 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 IGLV11-55A0A075B6I3 123 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 IGHV5-51A0A0C4DH38 117 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 A0A0G2JMP0 313 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 A0A0U1RQV1 116 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 A0A0X1KG70 313 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 FAM168BA1KXE4 195 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 MYBPHLA2RUH7 354 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 FFAR1O14842 300 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 SS18L1O75177 396 aaPredicted RBP2.7□□□□□ -1.98
PMS1-216ENST00000447734 EPPINO95925 133 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 CYB5R3P00387 301 aaPredicted RBP2.7□□□□□ -1.98
PMS1-216ENST00000447734 FABP1P07148 127 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 CCR7P32248 378 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 NUDT1P36639 197 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 CRISP3P54108 245 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 TAS2R43P59537 309 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 RAP1AP62834 184 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 MEF2CQ06413 473 aaPredicted RBP2.7□□□□□ -1.98
PMS1-216ENST00000447734 DAZ2Q13117 558 aaKnown RBP2.7□□□□□ -1.98
PMS1-216ENST00000447734 HIST3H3Q16695 136 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 LRRC75BQ2VPJ9 315 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 CLLU1OSQ5K130 101 aa2.7□□□□□ -1.98
PMS1-216ENST00000447734 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms