RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 TMEM182Q6ZP80 229 aaPredicted RBP16.51■□□□□ 0.23
SDCBP-204ENST00000447182 Q6ZPA2 131 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 FAM24BQ8N5W8 94 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 FAM213BQ8TBF2 198 aa16.51■□□□□ 0.23
SDCBP-204ENST00000447182 C3orf85A0A1B0GTC6 90 aa16.5■□□□□ 0.23
SDCBP-204ENST00000447182 hCG_38984A0A1B0GV85 526 aa16.5■□□□□ 0.23
SDCBP-204ENST00000447182 GJE1A6NN92 205 aa16.5■□□□□ 0.23
SDCBP-204ENST00000447182 MPPED1O15442 326 aa16.5■□□□□ 0.23
SDCBP-204ENST00000447182 EXT1Q16394 746 aa16.5■□□□□ 0.23
SDCBP-204ENST00000447182 CPT1CQ8TCG5 803 aa16.5■□□□□ 0.23
SDCBP-204ENST00000447182 CD300LFQ8TDQ1 290 aa16.5■□□□□ 0.23
SDCBP-204ENST00000447182 YPEL4Q96NS1 127 aa16.5■□□□□ 0.23
SDCBP-204ENST00000447182 TECTBQ96PL2 329 aa16.5■□□□□ 0.23
SDCBP-204ENST00000447182 ZNF700Q9H0M5 742 aa16.5■□□□□ 0.23
SDCBP-204ENST00000447182 TMEM222Q9H0R3 208 aa16.5■□□□□ 0.23
SDCBP-204ENST00000447182 GSN-AS1Q9NRJ2 163 aa16.5■□□□□ 0.23
SDCBP-204ENST00000447182 SLC7A11Q9UPY5 501 aa16.5■□□□□ 0.23
SDCBP-204ENST00000447182 CACNA1EQ15878 2313 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 TRDCB7Z8K6 153 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 PITX3O75364 302 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 PPYP01298 95 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 OR8U8P0C7N1 319 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 ZNF32P17041 273 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 RBM11P57052 281 aaKnown RBP16.49■□□□□ 0.23
SDCBP-204ENST00000447182 RAC3P60763 192 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 ABHD14BQ96IU4 210 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 TMEM56Q96MV1 263 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 ZNF576Q9H609 170 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 CRLF2Q9HC73 371 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 TMEM56-RWDD3S4R434 201 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 A0A1W2PPE2 198 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 CBR3O75828 277 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 ARG1P05089 322 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 FUT3P21217 361 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 EPHA8P29322 1005 aaPredicted RBP16.49■□□□□ 0.23
SDCBP-204ENST00000447182 SSR4P51571 173 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 STARD6P59095 220 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 SOHLH1Q5JUK2 328 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 Q6ZS49 121 aa16.49■□□□□ 0.23
SDCBP-204ENST00000447182 NKX2-6A6NCS4 301 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 BTBD17A6NE02 478 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 LINC00587B1AMM8 73 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 AP4M1O00189 453 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 OR13C7P0DN81 318 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 COX6A1P12074 109 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 HTR5AP47898 357 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 PRSS12P56730 875 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 SPEM1Q8N4L4 309 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 ZNF565Q8N9K5 539 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 SUMF2Q8NBJ7 301 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 OR14L1PQ8NHC6 308 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 OCIAD1Q9NX40 245 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 FGF5P12034 268 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 NTF4P34130 210 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 RPS23P62266 143 aaKnown RBP16.48■□□□□ 0.23
SDCBP-204ENST00000447182 DAZAP2Q15038 168 aaPredicted RBP16.48■□□□□ 0.23
SDCBP-204ENST00000447182 HIKESHIQ53FT3 197 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 ADAM5Q6NVV9 412 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 MEX3BQ6ZN04 569 aaKnown RBP16.48■□□□□ 0.23
SDCBP-204ENST00000447182 LURAP1LQ8IV03 231 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 AKR7LQ8NHP1 331 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 M1APQ8TC57 530 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 TCTEX1D2Q8WW35 142 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 JSRP1Q96MG2 331 aaPredicted RBP16.48■□□□□ 0.23
SDCBP-204ENST00000447182 SPIN2AQ99865 258 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 SPIN2BQ9BPZ2 258 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 PLEKHF2Q9H8W4 249 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 UNKLQ9H9P5 680 aaKnown RBP16.48■□□□□ 0.23
SDCBP-204ENST00000447182 NIT2Q9NQR4 276 aa16.48■□□□□ 0.23
SDCBP-204ENST00000447182 IGSF23A1L1A6 192 aa16.47■□□□□ 0.23
SDCBP-204ENST00000447182 FAM24AA6NFZ4 105 aa16.47■□□□□ 0.23
SDCBP-204ENST00000447182 UMODP07911 640 aa16.47■□□□□ 0.23
SDCBP-204ENST00000447182 ATP6V0CP27449 155 aa16.47■□□□□ 0.23
SDCBP-204ENST00000447182 GNRHRP30968 328 aa16.47■□□□□ 0.23
SDCBP-204ENST00000447182 NKX2-1P43699 371 aaPredicted RBP16.47■□□□□ 0.23
SDCBP-204ENST00000447182 RND3P61587 244 aa16.47■□□□□ 0.23
SDCBP-204ENST00000447182 PSG4Q00888 419 aa16.47■□□□□ 0.23
SDCBP-204ENST00000447182 SRSF7Q16629 238 aaKnown RBP eCLIP16.47■□□□□ 0.23
SDCBP-204ENST00000447182 Q8NFD4 153 aa16.47■□□□□ 0.23
SDCBP-204ENST00000447182 OR2G3Q8NGZ4 309 aa16.47■□□□□ 0.23
SDCBP-204ENST00000447182 OR51M1Q9H341 326 aa16.47■□□□□ 0.23
SDCBP-204ENST00000447182 LYRM2Q9NU23 88 aaPredicted RBP16.47■□□□□ 0.23
SDCBP-204ENST00000447182 RBFOX3A6NFN3 312 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 G3V3Y1 287 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 IFNA17P01571 189 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 EIF2S3P41091 472 aaKnown RBP16.46■□□□□ 0.23
SDCBP-204ENST00000447182 B3GALT5-AS1P59052 145 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 ZNF92Q03936 586 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 TRIM61Q5EBN2 209 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 SP5Q6BEB4 398 aaPredicted RBP16.46■□□□□ 0.23
SDCBP-204ENST00000447182 SPSB3Q6PJ21 355 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 HEPN1Q6WQI6 88 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 RARRES2Q99969 163 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 PAPOLGQ9BWT3 736 aaKnown RBP16.46■□□□□ 0.23
SDCBP-204ENST00000447182 OR2H1Q9GZK4 316 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 SLC25A31Q9H0C2 315 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 ZNF442Q9H7R0 627 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 FAM86C1Q9NVL1 165 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 ZNF816-ZNF321PA0A0X1KG74 233 aa16.46■□□□□ 0.23
SDCBP-204ENST00000447182 MED19A0JLT2 244 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms