RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 ARHGAP11BQ3KRB8 267 aa11.42□□□□□ -0.58
DDX56-206ENST00000446987 VAX1Q5SQQ9 334 aa11.42□□□□□ -0.58
DDX56-206ENST00000446987 NCR3LG1Q68D85 454 aa11.42□□□□□ -0.58
DDX56-206ENST00000446987 LEMD1Q68G75 181 aa11.42□□□□□ -0.58
DDX56-206ENST00000446987 DPY19L2P2Q6ZN68 376 aa11.42□□□□□ -0.58
DDX56-206ENST00000446987 C16orf47Q6ZP98 133 aaPredicted RBP11.42□□□□□ -0.58
DDX56-206ENST00000446987 TGIF2LYQ8IUE0 185 aa11.42□□□□□ -0.58
DDX56-206ENST00000446987 NUP43Q8NFH3 380 aa11.42□□□□□ -0.58
DDX56-206ENST00000446987 DAZLQ92904 295 aaKnown RBP11.42□□□□□ -0.58
DDX56-206ENST00000446987 C16orf58Q96GQ5 468 aa11.42□□□□□ -0.58
DDX56-206ENST00000446987 NIPSNAP3BQ9BS92 247 aa11.42□□□□□ -0.58
DDX56-206ENST00000446987 MSL2Q9HCI7 577 aa11.42□□□□□ -0.58
DDX56-206ENST00000446987 ANAPC10Q9UM13 185 aa11.42□□□□□ -0.58
DDX56-206ENST00000446987 TRAV27A0A087WT01 109 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 K7N7A8 449 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 DEDDO75618 318 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 DBIP07108 87 aaKnown RBP11.41□□□□□ -0.58
DDX56-206ENST00000446987 PGA4P0DJD7 388 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 PGA5P0DJD9 388 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 ZNF708P17019 499 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 HNF1AP20823 631 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 SLC37A1P57057 533 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 TMEM33P57088 247 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 KLF3P57682 345 aaPredicted RBP11.41□□□□□ -0.58
DDX56-206ENST00000446987 EIF2B1Q14232 305 aaKnown RBP11.41□□□□□ -0.58
DDX56-206ENST00000446987 ZNF260Q3ZCT1 412 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 COL5A1-AS1Q5SY13 56 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 FHL5Q5TD97 284 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 ZNF468Q5VIY5 522 aaPredicted RBP11.41□□□□□ -0.58
DDX56-206ENST00000446987 LINC00696Q6ZRV3 163 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 ZNF429Q86V71 674 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 ZNF679Q8IYX0 411 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 LRRC25Q8N386 305 aaPredicted RBP11.41□□□□□ -0.58
DDX56-206ENST00000446987 ZNF676Q8N7Q3 588 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 Q8NA96 180 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 NPEPL1Q8NDH3 523 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 SNX22Q96L94 193 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 TNFRSF13CQ96RJ3 184 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 GAL3ST4Q96RP7 486 aa11.41□□□□□ -0.58
DDX56-206ENST00000446987 YLPM1P49750 1951 aaKnown RBP11.41□□□□□ -0.58
DDX56-206ENST00000446987 NDUFS8O00217 210 aa11.4□□□□□ -0.58
DDX56-206ENST00000446987 NXPH2O95156 264 aa11.4□□□□□ -0.58
DDX56-206ENST00000446987 CSNK2A2P19784 350 aaPredicted RBP11.4□□□□□ -0.58
DDX56-206ENST00000446987 OR10J1P30954 320 aa11.4□□□□□ -0.58
DDX56-206ENST00000446987 RPL4P36578 427 aaKnown RBP11.4□□□□□ -0.58
DDX56-206ENST00000446987 MLF1P58340 268 aa11.4□□□□□ -0.58
DDX56-206ENST00000446987 LINC01590Q5TEZ4 76 aa11.4□□□□□ -0.58
DDX56-206ENST00000446987 GPR157Q5UAW9 335 aa11.4□□□□□ -0.58
DDX56-206ENST00000446987 TEX38Q6PEX7 206 aa11.4□□□□□ -0.58
DDX56-206ENST00000446987 CLEC18BQ6UXF7 455 aa11.4□□□□□ -0.58
DDX56-206ENST00000446987 FBXW12Q6X9E4 464 aa11.4□□□□□ -0.58
DDX56-206ENST00000446987 ZNF843Q8N446 348 aa11.4□□□□□ -0.58
DDX56-206ENST00000446987 OR4K13Q8NH42 304 aa11.4□□□□□ -0.58
DDX56-206ENST00000446987 OR51A7Q8NH64 312 aa11.4□□□□□ -0.58
DDX56-206ENST00000446987 ADAMTS15Q8TE58 950 aa11.4□□□□□ -0.58
DDX56-206ENST00000446987 ASB5Q8WWX0 329 aa11.4□□□□□ -0.58
DDX56-206ENST00000446987 PYGO2Q9BRQ0 406 aa11.4□□□□□ -0.58
DDX56-206ENST00000446987 GLRX2Q9NS18 164 aa11.4□□□□□ -0.58
DDX56-206ENST00000446987 ZNF346Q9UL40 294 aaKnown RBP11.4□□□□□ -0.58
DDX56-206ENST00000446987 WDR45Q9Y484 360 aa11.4□□□□□ -0.58
DDX56-206ENST00000446987 DIRAS3O95661 229 aa11.4□□□□□ -0.59
DDX56-206ENST00000446987 CYB5R3P00387 301 aaPredicted RBP11.4□□□□□ -0.59
DDX56-206ENST00000446987 FPR2P25090 351 aa11.4□□□□□ -0.59
DDX56-206ENST00000446987 HLA-DRB3P79483 266 aa11.4□□□□□ -0.59
DDX56-206ENST00000446987 PSG6Q00889 435 aa11.4□□□□□ -0.59
DDX56-206ENST00000446987 EXOSC7Q15024 291 aaKnown RBP11.4□□□□□ -0.59
DDX56-206ENST00000446987 TRMT12Q53H54 448 aaKnown RBP11.4□□□□□ -0.59
DDX56-206ENST00000446987 ZNF506Q5JVG8 444 aa11.4□□□□□ -0.59
DDX56-206ENST00000446987 C1orf100Q5SVJ3 147 aa11.4□□□□□ -0.59
DDX56-206ENST00000446987 SP5Q6BEB4 398 aaPredicted RBP11.4□□□□□ -0.59
DDX56-206ENST00000446987 TRAPPC6BQ86SZ2 158 aa11.4□□□□□ -0.59
DDX56-206ENST00000446987 FAM219AQ8IW50 185 aa11.4□□□□□ -0.59
DDX56-206ENST00000446987 ZNF441Q8N8Z8 693 aa11.4□□□□□ -0.59
DDX56-206ENST00000446987 OR4X1Q8NH49 305 aa11.4□□□□□ -0.59
DDX56-206ENST00000446987 THAP3Q8WTV1 239 aaPredicted RBP11.4□□□□□ -0.59
DDX56-206ENST00000446987 SLC35A4Q96G79 324 aa11.4□□□□□ -0.59
DDX56-206ENST00000446987 OR10C1Q96KK4 312 aa11.4□□□□□ -0.59
DDX56-206ENST00000446987 MIEN1Q9BRT3 115 aa11.4□□□□□ -0.59
DDX56-206ENST00000446987 PCGF1Q9BSM1 259 aa11.4□□□□□ -0.59
DDX56-206ENST00000446987 PLA2G3Q9NZ20 509 aa11.4□□□□□ -0.59
DDX56-206ENST00000446987 EML6Q6ZMW3 1958 aa11.4□□□□□ -0.59
DDX56-206ENST00000446987 NKX6-3A6NJ46 265 aa11.39□□□□□ -0.59
DDX56-206ENST00000446987 PRR32B1ATL7 298 aa11.39□□□□□ -0.59
DDX56-206ENST00000446987 ETV2O00321 342 aaPredicted RBP11.39□□□□□ -0.59
DDX56-206ENST00000446987 FCMRO60667 390 aa11.39□□□□□ -0.59
DDX56-206ENST00000446987 NID1P14543 1247 aa11.39□□□□□ -0.59
DDX56-206ENST00000446987 Q6ZS92 163 aa11.39□□□□□ -0.59
DDX56-206ENST00000446987 SSX7Q7RTT5 188 aa11.39□□□□□ -0.59
DDX56-206ENST00000446987 NUFIP2Q7Z417 695 aaKnown RBP11.39□□□□□ -0.59
DDX56-206ENST00000446987 CDC20BQ86Y33 519 aa11.39□□□□□ -0.59
DDX56-206ENST00000446987 GCNT2Q8N0V5 402 aa11.39□□□□□ -0.59
DDX56-206ENST00000446987 COX18Q8N8Q8 333 aa11.39□□□□□ -0.59
DDX56-206ENST00000446987 SLC26A10Q8NG04 563 aa11.39□□□□□ -0.59
DDX56-206ENST00000446987 ORAOV1Q8WV07 137 aa11.39□□□□□ -0.59
DDX56-206ENST00000446987 TMEM230Q96A57 120 aa11.39□□□□□ -0.59
DDX56-206ENST00000446987 C4orf45Q96LM5 186 aa11.39□□□□□ -0.59
DDX56-206ENST00000446987 LMF1Q96S06 567 aa11.39□□□□□ -0.59
DDX56-206ENST00000446987 DIRC2Q96SL1 478 aa11.39□□□□□ -0.59
DDX56-206ENST00000446987 GPX7Q96SL4 187 aaPredicted RBP11.39□□□□□ -0.59
DDX56-206ENST00000446987 FAAP24Q9BTP7 215 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms