RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 NUDT19A8MXV4 375 aa15.32■□□□□ 0.04
CLDN9-201ENST00000445369 K7EPK0 472 aa15.32■□□□□ 0.04
CLDN9-201ENST00000445369 AADACP22760 399 aa15.32■□□□□ 0.04
CLDN9-201ENST00000445369 ARR3P36575 388 aa15.32■□□□□ 0.04
CLDN9-201ENST00000445369 HAAOP46952 286 aa15.32■□□□□ 0.04
CLDN9-201ENST00000445369 GPM6AP51674 278 aa15.32■□□□□ 0.04
CLDN9-201ENST00000445369 FGF12P61328 243 aa15.32■□□□□ 0.04
CLDN9-201ENST00000445369 LIAT1Q6ZQX7 453 aa15.32■□□□□ 0.04
CLDN9-201ENST00000445369 Q6ZS49 121 aa15.32■□□□□ 0.04
CLDN9-201ENST00000445369 NUFIP2Q7Z417 695 aaKnown RBP15.32■□□□□ 0.04
CLDN9-201ENST00000445369 FAM71E2Q8N5Q1 922 aa15.32■□□□□ 0.04
CLDN9-201ENST00000445369 EXTL1Q92935 676 aa15.32■□□□□ 0.04
CLDN9-201ENST00000445369 C18orf12Q96KH6 178 aa15.32■□□□□ 0.04
CLDN9-201ENST00000445369 TMEM218A2RU14 115 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 H7C1Q1 480 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 RAB1AP62820 205 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 DEFA5Q01523 94 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 SMUG1Q53HV7 270 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 OR5L1Q8NGL2 311 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 OR11L1Q8NGX0 322 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 MSI2Q96DH6 328 aaKnown RBP15.31■□□□□ 0.04
CLDN9-201ENST00000445369 TAF9BQ9HBM6 251 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 MMP26Q9NRE1 261 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 ZNF629Q9UEG4 869 aaPredicted RBP15.31■□□□□ 0.04
CLDN9-201ENST00000445369 AMDHD2Q9Y303 409 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 LSM5Q9Y4Y9 91 aaKnown RBP15.31■□□□□ 0.04
CLDN9-201ENST00000445369 LIPGQ9Y5X9 500 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 R4GN57 208 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 GPR179Q6PRD1 2367 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 ZNF705EA8MWA4 302 aaPredicted RBP15.31■□□□□ 0.04
CLDN9-201ENST00000445369 TNFSF15O95150 251 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 NGFP01138 241 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 PPYP01298 95 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 RCC1P18754 421 aaPredicted RBP15.31■□□□□ 0.04
CLDN9-201ENST00000445369 HERV-K104P61576 105 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 HES3Q5TGS1 186 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 TMEM268Q5VZI3 342 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 LYZL2Q7Z4W2 148 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 GLYATL2Q8WU03 294 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 SMIM8Q96KF7 97 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 FER1L6-AS2Q96M78 137 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 SYT3Q9BQG1 590 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 ZC4H2Q9NQZ6 224 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 PLSCR2Q9NRY7 297 aa15.31■□□□□ 0.04
CLDN9-201ENST00000445369 RCC2Q9P258 522 aaKnown RBP15.31■□□□□ 0.04
CLDN9-201ENST00000445369 KLRC4-KLRK1H3BQV0 150 aa15.3■□□□□ 0.04
CLDN9-201ENST00000445369 LRP3O75074 770 aa15.3■□□□□ 0.04
CLDN9-201ENST00000445369 MBPP02686 304 aaPredicted RBP15.3■□□□□ 0.04
CLDN9-201ENST00000445369 GAPDHP04406 335 aaKnown RBP15.3■□□□□ 0.04
CLDN9-201ENST00000445369 SRSF7Q16629 238 aaKnown RBP eCLIP15.3■□□□□ 0.04
CLDN9-201ENST00000445369 IGSF11Q5DX21 431 aa15.3■□□□□ 0.04
CLDN9-201ENST00000445369 CCDC71LQ8N9Z2 235 aa15.3■□□□□ 0.04
CLDN9-201ENST00000445369 OR4A4PQ8NGN8 299 aa15.3■□□□□ 0.04
CLDN9-201ENST00000445369 SAT2Q96F10 170 aaPredicted RBP15.3■□□□□ 0.04
CLDN9-201ENST00000445369 HS3ST6Q96QI5 342 aa15.3■□□□□ 0.04
CLDN9-201ENST00000445369 OPA3Q9H6K4 179 aa15.3■□□□□ 0.04
CLDN9-201ENST00000445369 FBXL17Q9UF56 701 aa15.3■□□□□ 0.04
CLDN9-201ENST00000445369 ZNF732B4DXR9 585 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 PRSS44E7EML9 344 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 DNASE2O00115 360 aaPredicted RBP15.29■□□□□ 0.04
CLDN9-201ENST00000445369 ABCD4O14678 606 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 TPD52L2O43399 206 aaKnown RBP15.29■□□□□ 0.04
CLDN9-201ENST00000445369 ATG12O94817 140 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 SCGB1D2O95969 90 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 NAPSAO96009 420 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 ADCYAP1P18509 176 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 ATF4P18848 351 aaPredicted RBP15.29■□□□□ 0.04
CLDN9-201ENST00000445369 EIF5AL1Q6IS14 154 aaKnown RBP15.29■□□□□ 0.04
CLDN9-201ENST00000445369 IL34Q6ZMJ4 242 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 MCEMP1Q8IX19 187 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 LGI3Q8N145 548 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 ZFP62Q8NB50 900 aaPredicted RBP15.29■□□□□ 0.04
CLDN9-201ENST00000445369 ZNF552Q9H707 407 aaPredicted RBP15.29■□□□□ 0.04
CLDN9-201ENST00000445369 PLEKHA2Q9HB19 425 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 MTCH1Q9NZJ7 389 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 PRSS50Q9UI38 385 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 TRIM77I1YAP6 450 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 NUPL2O15504 423 aaKnown RBP15.29■□□□□ 0.04
CLDN9-201ENST00000445369 ARHGDIBP52566 201 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 AKR1C2P52895 323 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 AKR1C1Q04828 323 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 MPV17LQ2QL34 196 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 OR5A2Q8NGI9 324 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 NKX6-2Q9C056 277 aaPredicted RBP15.29■□□□□ 0.04
CLDN9-201ENST00000445369 Q9N2K0 584 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 FAM86C1Q9NVL1 165 aa15.29■□□□□ 0.04
CLDN9-201ENST00000445369 CD300LBA8K4G0 201 aa15.28■□□□□ 0.04
CLDN9-201ENST00000445369 E5RGE8 158 aa15.28■□□□□ 0.04
CLDN9-201ENST00000445369 TMEM33P57088 247 aa15.28■□□□□ 0.04
CLDN9-201ENST00000445369 SRSF3P84103 164 aaKnown RBP15.28■□□□□ 0.04
CLDN9-201ENST00000445369 PLP2Q04941 152 aa15.28■□□□□ 0.04
CLDN9-201ENST00000445369 OR5T2Q8NGG2 359 aa15.28■□□□□ 0.04
CLDN9-201ENST00000445369 IL36RNQ9UBH0 155 aa15.28■□□□□ 0.04
CLDN9-201ENST00000445369 NSG2Q9Y328 171 aa15.28■□□□□ 0.04
CLDN9-201ENST00000445369 BDP1A6H8Y1 2624 aa15.28■□□□□ 0.04
CLDN9-201ENST00000445369 PHF1O43189 567 aaPredicted RBP15.28■□□□□ 0.04
CLDN9-201ENST00000445369 JTBO76095 146 aa15.28■□□□□ 0.04
CLDN9-201ENST00000445369 GLI4P10075 376 aa15.28■□□□□ 0.04
CLDN9-201ENST00000445369 SULT1A2P50226 295 aa15.28■□□□□ 0.04
CLDN9-201ENST00000445369 PJVKQ0ZLH3 352 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms