RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 SPENQ96T58 3664 aaKnown RBP11.72□□□□□ -0.53
RBM39-216ENST00000444878 LAMA5O15230 3695 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 MGAQ8IWI9 3026 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 AHRRA9YTQ3 701 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 KLK10O43240 276 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 SYNGR1O43759 233 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 SMPD2O60906 423 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 CA6P23280 308 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 CYCSP99999 105 aaKnown RBP11.72□□□□□ -0.53
RBM39-216ENST00000444878 TSC22D1Q15714 1073 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 ANKRD55Q3KP44 614 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 ACSF3Q4G176 576 aaPredicted RBP11.72□□□□□ -0.53
RBM39-216ENST00000444878 NHLRC3Q5JS37 347 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 CLLU1Q5K131 121 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 ZNF585AQ6P3V2 769 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 INO80CQ6PI98 192 aaPredicted RBP11.72□□□□□ -0.53
RBM39-216ENST00000444878 DHRS11Q6UWP2 260 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 THAP6Q8TBB0 222 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 EXTL1Q92935 676 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 LRFN3Q9BTN0 628 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 GSX2Q9BZM3 304 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 CHMP1AQ9HD42 196 aaPredicted RBP11.72□□□□□ -0.53
RBM39-216ENST00000444878 DECR2Q9NUI1 292 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 PRR13Q9NZ81 148 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 LHX6Q9UPM6 363 aa11.72□□□□□ -0.53
RBM39-216ENST00000444878 A0A0D9SG52 128 aa11.71□□□□□ -0.53
RBM39-216ENST00000444878 LINC00862A6NCI5 91 aa11.71□□□□□ -0.53
RBM39-216ENST00000444878 CTSDP07339 412 aaPredicted RBP11.71□□□□□ -0.53
RBM39-216ENST00000444878 PPP1CBP62140 327 aa11.71□□□□□ -0.53
RBM39-216ENST00000444878 ATXN7L3Q14CW9 347 aaPredicted RBP11.71□□□□□ -0.53
RBM39-216ENST00000444878 MPV17LQ2QL34 196 aa11.71□□□□□ -0.53
RBM39-216ENST00000444878 IGFL3Q6UXB1 125 aa11.71□□□□□ -0.53
RBM39-216ENST00000444878 FBXW12Q6X9E4 464 aa11.71□□□□□ -0.53
RBM39-216ENST00000444878 PCNPQ8WW12 178 aaKnown RBP11.71□□□□□ -0.53
RBM39-216ENST00000444878 MARS2Q96GW9 593 aaKnown RBP11.71□□□□□ -0.53
RBM39-216ENST00000444878 CCDC120Q96HB5 630 aa11.71□□□□□ -0.53
RBM39-216ENST00000444878 NMES1Q9C002 83 aa11.71□□□□□ -0.53
RBM39-216ENST00000444878 OR2J1Q9GZK6 312 aa11.71□□□□□ -0.53
RBM39-216ENST00000444878 LIME1Q9H400 295 aa11.71□□□□□ -0.53
RBM39-216ENST00000444878 MAP1BP46821 2468 aaKnown RBP11.71□□□□□ -0.53
RBM39-216ENST00000444878 RPS10-NUDT3A0A1W2PQS6 291 aa11.71□□□□□ -0.54
RBM39-216ENST00000444878 ADAP1O75689 374 aa11.71□□□□□ -0.54
RBM39-216ENST00000444878 ZNF205O95201 554 aa11.71□□□□□ -0.54
RBM39-216ENST00000444878 CRHP06850 196 aa11.71□□□□□ -0.54
RBM39-216ENST00000444878 HOXB1P14653 301 aaPredicted RBP11.71□□□□□ -0.54
RBM39-216ENST00000444878 PRKACAP17612 351 aa11.71□□□□□ -0.54
RBM39-216ENST00000444878 PSMB6P28072 239 aa11.71□□□□□ -0.54
RBM39-216ENST00000444878 CALCRP30988 508 aa11.71□□□□□ -0.54
RBM39-216ENST00000444878 SGPP2Q8IWX5 399 aa11.71□□□□□ -0.54
RBM39-216ENST00000444878 TOMM40LQ969M1 308 aa11.71□□□□□ -0.54
RBM39-216ENST00000444878 HS3ST6Q96QI5 342 aa11.71□□□□□ -0.54
RBM39-216ENST00000444878 DHRS9Q9BPW9 319 aa11.71□□□□□ -0.54
RBM39-216ENST00000444878 MICU1Q9BPX6 476 aa11.71□□□□□ -0.54
RBM39-216ENST00000444878 WDR13Q9H1Z4 485 aa11.71□□□□□ -0.54
RBM39-216ENST00000444878 PLK3Q9H4B4 646 aa11.71□□□□□ -0.54
RBM39-216ENST00000444878 METTL8Q9H825 291 aaKnown RBP11.71□□□□□ -0.54
RBM39-216ENST00000444878 TNFSF18Q9UNG2 199 aa11.71□□□□□ -0.54
RBM39-216ENST00000444878 TEX13DA0A0J9YY54 714 aaPredicted RBP11.7□□□□□ -0.54
RBM39-216ENST00000444878 OR2F2O95006 317 aa11.7□□□□□ -0.54
RBM39-216ENST00000444878 IFNA2P01563 188 aa11.7□□□□□ -0.54
RBM39-216ENST00000444878 PF4V1P10720 104 aa11.7□□□□□ -0.54
RBM39-216ENST00000444878 SPINK2P20155 84 aa11.7□□□□□ -0.54
RBM39-216ENST00000444878 COX5AP20674 150 aa11.7□□□□□ -0.54
RBM39-216ENST00000444878 FCGR2CP31995 323 aa11.7□□□□□ -0.54
RBM39-216ENST00000444878 PTGER4P35408 488 aa11.7□□□□□ -0.54
RBM39-216ENST00000444878 RBMXP38159 391 aaKnown RBP11.7□□□□□ -0.54
RBM39-216ENST00000444878 GLP1RP43220 463 aa11.7□□□□□ -0.54
RBM39-216ENST00000444878 FOXF2Q12947 444 aa11.7□□□□□ -0.54
RBM39-216ENST00000444878 OR2F1Q13607 317 aa11.7□□□□□ -0.54
RBM39-216ENST00000444878 ZNF345Q14585 488 aa11.7□□□□□ -0.54
RBM39-216ENST00000444878 PLEKHN1Q494U1 663 aaPredicted RBP11.7□□□□□ -0.54
RBM39-216ENST00000444878 SLC51BQ86UW2 128 aa11.7□□□□□ -0.54
RBM39-216ENST00000444878 NEK7Q8TDX7 302 aa11.7□□□□□ -0.54
RBM39-216ENST00000444878 EAF1Q96JC9 268 aaPredicted RBP11.7□□□□□ -0.54
RBM39-216ENST00000444878 IL36RNQ9UBH0 155 aa11.7□□□□□ -0.54
RBM39-216ENST00000444878 LEUTXA8MZ59 168 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 ZNF728P0DKX0 622 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 DUSP1P28562 367 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 FXYD4P59646 89 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 CTAG1AP78358 180 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 IL24Q13007 206 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 ODF1Q14990 250 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 ALKAL2Q6UX46 152 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 Q6ZPA2 131 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 ACOT7LQ6ZUV0 252 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 KCNRGQ8N5I3 272 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 INO80EQ8NBZ0 244 aaPredicted RBP11.69□□□□□ -0.54
RBM39-216ENST00000444878 C1orf162Q8NEQ5 155 aaPredicted RBP11.69□□□□□ -0.54
RBM39-216ENST00000444878 C1QTNF6Q9BXI9 259 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 PKIBQ9C010 78 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 RCC2Q9P258 522 aaKnown RBP11.69□□□□□ -0.54
RBM39-216ENST00000444878 MBD2Q9UBB5 411 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 RP1L1Q8IWN7 2480 aaPredicted RBP11.69□□□□□ -0.54
RBM39-216ENST00000444878 KANTRA0A1W2PQU2 76 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 HSPB6O14558 160 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 CBR1P16152 277 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 EIF2S3P41091 472 aaKnown RBP11.69□□□□□ -0.54
RBM39-216ENST00000444878 UCP2P55851 309 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 PIGPP57054 158 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 ERVS71-1P61550 626 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms