RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 UQCR10Q9UDW1 63 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 BTAF1O14981 1849 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 ELNP15502 786 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 KITLGP21583 273 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 APOBEC1P41238 236 aaKnown RBP4.41□□□□□ -1.7
HERC1-201ENST00000443617 WASP42768 502 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 ZNF121P58317 390 aaPredicted RBP4.41□□□□□ -1.7
HERC1-201ENST00000443617 TLE1Q04724 770 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 PLCXD2Q0VAA5 305 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 ANKRD33Q7Z3H0 272 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 ZNF738Q8NE65 137 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 SLC35E1Q96K37 410 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 PATZ1Q9HBE1 687 aaKnown RBP4.41□□□□□ -1.7
HERC1-201ENST00000443617 RPS18P62269 152 aaKnown RBP4.41□□□□□ -1.7
HERC1-201ENST00000443617 HTD2P86397 168 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 LIAT1Q6ZQX7 453 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 SLC25A26Q70HW3 274 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 ZGRF1Q86YA3 2104 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 OR5L2Q8NGL0 311 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 OR10J5Q8NHC4 309 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 RAB40CQ96S21 281 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 RGPD3A6NKT7 1758 aaPredicted RBP4.41□□□□□ -1.7
HERC1-201ENST00000443617 CISD3P0C7P0 127 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 DYNLT3P51808 116 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 TAS2R30P59541 319 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 YAF2Q8IY57 180 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 MRGPRX4Q96LA9 322 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 YPEL4Q96NS1 127 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 FOXQ1Q9C009 403 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 OR51B6Q9H340 312 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 RYDENQ9NUL5 291 aaKnown RBP4.41□□□□□ -1.7
HERC1-201ENST00000443617 SIP14410 1827 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 CT45A8P0DMV1 189 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 CT45A9P0DMV2 189 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 VIPR2P41587 438 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 PCK2Q16822 640 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 CT45A2Q5DJT8 189 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 ZNF776Q68DI1 518 aaPredicted RBP4.41□□□□□ -1.7
HERC1-201ENST00000443617 SPRED2Q7Z698 418 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 CHST11Q9NPF2 352 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 LCTP09848 1927 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 F5H5K5 113 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 CHST1O43916 411 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 OR1D4P47884 311 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 RND2P52198 227 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 DMWDQ09019 674 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 PRICKLE4Q2TBC4 344 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 APH1AQ96BI3 265 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 PECRQ9BY49 303 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 PARD6GQ9BYG4 376 aaPredicted RBP4.41□□□□□ -1.7
HERC1-201ENST00000443617 PDCD11Q14690 1871 aaKnown RBP4.41□□□□□ -1.7
HERC1-201ENST00000443617 NUFIP2Q7Z417 695 aaKnown RBP4.41□□□□□ -1.7
HERC1-201ENST00000443617 H1FOOQ8IZA3 346 aaPredicted RBP4.41□□□□□ -1.7
HERC1-201ENST00000443617 CIB3Q96Q77 187 aaPredicted RBP4.41□□□□□ -1.7
HERC1-201ENST00000443617 WIPI2Q9Y4P8 454 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 MAP1LC3B2A6NCE7 125 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 A8MXE2 369 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 CHRDL2Q6WN34 429 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 C18orf12Q96KH6 178 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 MAP1LC3BQ9GZQ8 125 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 TMEM14DPA8MWL7 114 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 PRAMEF26H0Y7S4 382 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 HRKO00198 91 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 CEACAM5P06731 702 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 COA6Q5JTJ3 125 aaKnown RBP4.41□□□□□ -1.7
HERC1-201ENST00000443617 BMFQ96LC9 184 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 TBC1D29Q9UFV1 150 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 VDAC3Q9Y277 283 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 PROB1E7EW31 1015 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 HCRTR1O43613 425 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 HNRNPA3P51991 378 aaKnown RBP4.41□□□□□ -1.7
HERC1-201ENST00000443617 RABEPKQ7Z6M1 372 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 OR2D3Q8NGH3 330 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 SEMA5BQ9P283 1151 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 BIDP55957 195 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 ERVS71-1P61550 626 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 C11orf40Q8WZ69 217 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 PTPRDP23468 1912 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 A0A0J9YY10 115 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 ZNF732B4DXR9 585 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 TMEM150CB9EJG8 249 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 DIRC3C9JPN6 131 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 MLF1P58340 268 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 CALHM2Q9HA72 323 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 CDH20Q9HBT6 801 aa4.41□□□□□ -1.7
HERC1-201ENST00000443617 ALPK3Q96L96 1907 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 A0A1W2PP55 124 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 MSMO1Q15800 293 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.4□□□□□ -1.7
HERC1-201ENST00000443617 FBXL14Q8N1E6 418 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 DYRK2Q92630 601 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 TSACCQ96A04 125 aaPredicted RBP4.4□□□□□ -1.7
HERC1-201ENST00000443617 NCOR1P1Q9H4R4 102 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 PI4KAP42356 2102 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 IGLV1-36A0A0B4J1U3 117 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 HSBP1L1C9JCN9 74 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 CA11O75493 328 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 TNFSF13O75888 250 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 IL33O95760 270 aa4.4□□□□□ -1.7
HERC1-201ENST00000443617 DEGS2Q6QHC5 323 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms