RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 F2RL1P55085 397 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 ARL4CP56559 192 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 ERVFC1-1P60608 527 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 MRPS25P82663 173 aaKnown RBP5.04□□□□□ -1.6
SSXP3-201ENST00000442971 OR1Q1Q15612 314 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 ECSCRQ19T08 205 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 RPEL1Q2QD12 228 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 PGS1Q32NB8 556 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 SMIM21Q3B7S5 101 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 GALNTL6Q49A17 601 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 TNFAIP8L3Q5GJ75 292 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 FAM76BQ5HYJ3 339 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 PYHIN1Q6K0P9 492 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 MOB3BQ86TA1 216 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 ASCC1Q8N9N2 400 aaKnown RBP5.04□□□□□ -1.6
SSXP3-201ENST00000442971 OR8H1Q8NGG4 311 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 DYDC1Q8WWB3 177 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 GALNT14Q96FL9 552 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 SPACA5Q96QH8 159 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 CNN2Q99439 309 aaKnown RBP5.04□□□□□ -1.6
SSXP3-201ENST00000442971 MRPL57Q9BQC6 102 aaKnown RBP5.04□□□□□ -1.6
SSXP3-201ENST00000442971 SLC35A5Q9BS91 424 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 KRTAP1-5Q9BYS1 174 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 MRPL46Q9H2W6 279 aaKnown RBP5.04□□□□□ -1.6
SSXP3-201ENST00000442971 ZCCHC4Q9H5U6 513 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 CALML5Q9NZT1 146 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 FAM30AQ9NZY2 134 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 UBQLN2Q9UHD9 624 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 ARL2BPQ9Y2Y0 163 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 AMMECR1Q9Y4X0 333 aaPredicted RBP5.04□□□□□ -1.6
SSXP3-201ENST00000442971 DNAH8Q96JB1 4490 aa5.04□□□□□ -1.6
SSXP3-201ENST00000442971 TCRBV9S1A1TA0A576 114 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 ANXA2P2A6NMY6 339 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 KPNA4O00629 521 aaPredicted RBP5.03□□□□□ -1.6
SSXP3-201ENST00000442971 RIPK2O43353 540 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 SNX3O60493 162 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 LYPLA1O75608 230 aaPredicted RBP5.03□□□□□ -1.6
SSXP3-201ENST00000442971 CPSF4O95639 269 aaKnown RBP5.03□□□□□ -1.6
SSXP3-201ENST00000442971 HLA-DQA2P01906 255 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 VIMP08670 466 aaKnown RBP5.03□□□□□ -1.6
SSXP3-201ENST00000442971 FOLR2P14207 255 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 BLVRBP30043 206 aaPredicted RBP5.03□□□□□ -1.6
SSXP3-201ENST00000442971 RASSF2P50749 326 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 SLC18A1P54219 525 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 TPTEP56180 551 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 NCALDP61601 193 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 MADCAM1Q13477 382 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 EDDM3AQ14507 147 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 CDK5R1Q15078 307 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 PPP1R7Q15435 360 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 MED22Q15528 200 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 GTDC1Q4AE62 458 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 HEPN1Q6WQI6 88 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 TPRX1Q8N7U7 411 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 BTBD10Q9BSF8 475 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 SPATA5L1Q9BVQ7 753 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 PAPOLGQ9BWT3 736 aaKnown RBP5.03□□□□□ -1.6
SSXP3-201ENST00000442971 OPA3Q9H6K4 179 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 OR14J1Q9UGF5 321 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 CELA1Q9UNI1 258 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 POLR1DQ9Y2S0 133 aa5.03□□□□□ -1.6
SSXP3-201ENST00000442971 RPL36Q9Y3U8 105 aaKnown RBP5.03□□□□□ -1.6
SSXP3-201ENST00000442971 IGHV7-81A0A0B4J1V7 117 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 C13orf42A0A1B0GVH6 325 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 MOSP00540 346 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 ABHD2P08910 425 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 ZNF20P17024 532 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 EDN2P20800 178 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 NPY1RP25929 384 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 CRISP3P54108 245 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 PLTPP55058 493 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 RPL27P61353 136 aaKnown RBP5.02□□□□□ -1.61
SSXP3-201ENST00000442971 TXNL4AP83876 142 aaKnown RBP5.02□□□□□ -1.61
SSXP3-201ENST00000442971 BNIP1Q12981 228 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 ODF1Q14990 250 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 UTF1Q5T230 341 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 CORO6Q6QEF8 472 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 CYS1Q717R9 158 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 TRAPPC6BQ86SZ2 158 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 OR6V1Q8N148 313 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 TCTEX1D1Q8N7M0 179 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 OR9G1Q8NH87 305 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 ZNF671Q8TAW3 534 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 RNF125Q96EQ8 232 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 RNF170Q96K19 258 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 FYTTD1Q96QD9 318 aaKnown RBP5.02□□□□□ -1.61
SSXP3-201ENST00000442971 MBOAT4Q96T53 435 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 PPIL3Q9H2H8 161 aaKnown RBP5.02□□□□□ -1.61
SSXP3-201ENST00000442971 NKIRAS1Q9NYS0 192 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 CNOT2Q9NZN8 540 aaKnown RBP5.02□□□□□ -1.61
SSXP3-201ENST00000442971 PEF1Q9UBV8 284 aaKnown RBP5.02□□□□□ -1.61
SSXP3-201ENST00000442971 LGALS13Q9UHV8 139 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 ENPP5Q9UJA9 477 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 ERGIC3Q9Y282 383 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 RHBDD3Q9Y3P4 386 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 LHFPL6Q9Y693 200 aa5.02□□□□□ -1.61
SSXP3-201ENST00000442971 A0A087X0M5 115 aa5.01□□□□□ -1.61
SSXP3-201ENST00000442971 A0A1B0GX30 115 aa5.01□□□□□ -1.61
SSXP3-201ENST00000442971 TRAPPC13A5PLN9 417 aa5.01□□□□□ -1.61
SSXP3-201ENST00000442971 H7C1C5 153 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms