RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 IL13RA2Q14627 380 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 PHLDA2Q53GA4 152 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 TSPO2Q5TGU0 170 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 CLEC9AQ6UXN8 241 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 LGI3Q8N145 548 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 C2CD4CQ8TF44 421 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 HPSE2Q8WWQ2 592 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 ZNF286AQ9HBT8 521 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 CRLF2Q9HC73 371 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 FOXJ2Q9P0K8 574 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 ZNF391Q9UJN7 358 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 PTPRZ1P23471 2315 aaPredicted RBP14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 CEP250Q9BV73 2442 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 hCG_38984A0A1B0GV85 526 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 XRCC2O43543 280 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 ZNF32P17041 273 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 TCN2P20062 427 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 LMO1P25800 156 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 NTF4P34130 210 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 NBL1P41271 181 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 FOLR3P41439 243 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 PPT1P50897 306 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 MLF1P58340 268 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 HABP2Q14520 560 aaPredicted RBP14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 ETV3LQ6ZN32 361 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 ZFP82Q8N141 532 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 FBXL14Q8N1E6 418 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 TMEM156Q8N614 296 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 OR5L1Q8NGL2 311 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 CPT1CQ8TCG5 803 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 SPRY4Q9C004 299 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 PARP12Q9H0J9 701 aaKnown RBP14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 LUZP4Q9P127 313 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 NME2P1O60361 137 aa14.17□□□□□ -0.14
CLCNKA-203ENST00000439316 HTR5AP47898 357 aa14.17□□□□□ -0.14
CLCNKA-203ENST00000439316 RPS18P62269 152 aaKnown RBP14.17□□□□□ -0.14
CLCNKA-203ENST00000439316 OR8B8Q15620 311 aa14.17□□□□□ -0.14
CLCNKA-203ENST00000439316 TMEM164Q5U3C3 297 aa14.17□□□□□ -0.14
CLCNKA-203ENST00000439316 Q6ZPA2 131 aa14.17□□□□□ -0.14
CLCNKA-203ENST00000439316 RPS19BP1Q86WX3 136 aaKnown RBP14.17□□□□□ -0.14
CLCNKA-203ENST00000439316 AKR7LQ8NHP1 331 aa14.17□□□□□ -0.14
CLCNKA-203ENST00000439316 CT55Q8WUE5 264 aa14.17□□□□□ -0.14
CLCNKA-203ENST00000439316 SFT2D1Q8WV19 159 aa14.17□□□□□ -0.14
CLCNKA-203ENST00000439316 CLCC1Q96S66 551 aa14.17□□□□□ -0.14
CLCNKA-203ENST00000439316 RGCCQ9H4X1 137 aa14.17□□□□□ -0.14
CLCNKA-203ENST00000439316 CNTRLQ7Z7A1 2325 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 SPAARA0A1B0GVQ0 90 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 FAM221AA4D161 298 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 ZNF716A6NP11 495 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 PDCD6O75340 191 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 B4GALT1P15291 398 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 GUK1Q16774 197 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 BRICD5Q6PL45 260 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 OR52M1Q8NGK5 317 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 OR11L1Q8NGX0 322 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 C14orf79Q96F83 325 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 SYT3Q9BQG1 590 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 RSRP1Q9BUV0 290 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 STRAPQ9Y3F4 350 aaKnown RBP14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 ARID1AO14497 2285 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 ST8SIA3O43173 380 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 SRD5A2P31213 254 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 GLP1RP43220 463 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 CAMLGP49069 296 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 RAB5CP51148 216 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 FUT6P51993 359 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 RAB5BP61020 215 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 PSG4Q00888 419 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 ZNF616Q08AN1 781 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 ZNF468Q5VIY5 522 aaPredicted RBP14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 FBXW12Q6X9E4 464 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 GGNQ86UU5 652 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 CCDC71LQ8N9Z2 235 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 OR4D5Q8NGN0 318 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 HIST1H2BAQ96A08 127 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 ALKBH3Q96Q83 286 aaPredicted RBP14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 WNT5BQ9H1J7 359 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 C19orf12Q9NSK7 152 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 FBXO9Q9UK97 447 aaPredicted RBP14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 TCFL5Q9UL49 500 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 ST3GAL6Q9Y274 331 aa14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 RCL1Q9Y2P8 373 aaKnown RBP14.16□□□□□ -0.14
CLCNKA-203ENST00000439316 FTH1P19P0C7X4 201 aa14.15□□□□□ -0.14
CLCNKA-203ENST00000439316 PATE4P0C8F1 98 aa14.15□□□□□ -0.14
CLCNKA-203ENST00000439316 PTAFRP25105 342 aa14.15□□□□□ -0.14
CLCNKA-203ENST00000439316 PMELP40967 661 aa14.15□□□□□ -0.14
CLCNKA-203ENST00000439316 MEOX2P50222 304 aa14.15□□□□□ -0.14
CLCNKA-203ENST00000439316 RBM11P57052 281 aaKnown RBP14.15□□□□□ -0.14
CLCNKA-203ENST00000439316 MALLQ13021 153 aa14.15□□□□□ -0.14
CLCNKA-203ENST00000439316 AWAT1Q58HT5 328 aa14.15□□□□□ -0.14
CLCNKA-203ENST00000439316 TMEM211Q6ICI0 200 aa14.15□□□□□ -0.14
CLCNKA-203ENST00000439316 KCNE4Q8WWG9 221 aa14.15□□□□□ -0.14
CLCNKA-203ENST00000439316 OR2H1Q9GZK4 316 aa14.15□□□□□ -0.14
CLCNKA-203ENST00000439316 SLC7A11Q9UPY5 501 aa14.15□□□□□ -0.14
CLCNKA-203ENST00000439316 TMED3Q9Y3Q3 217 aa14.15□□□□□ -0.14
CLCNKA-203ENST00000439316 NSG1A0A0A6YYJ2 146 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 A0A0G2JMM0 328 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 A0A1W2PPB8 328 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 A0A1W2PRS3 328 aa14.14□□□□□ -0.15
CLCNKA-203ENST00000439316 KIR3DP1A8MWS1 328 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms