RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 FOXN2P32314 431 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 NAA10P41227 235 aaPredicted RBP1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 GCLMP48507 274 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 SPINT3P49223 89 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 STC1P52823 247 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 CDH6P55285 790 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 ERCC8Q13216 396 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 SLC9A3R2Q15599 337 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 STK11Q15831 433 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 FAM83EQ2M2I3 478 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 LY6G6FQ5SQ64 297 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 HENMT1Q5T8I9 393 aaKnown RBP1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 ANKRD22Q5VYY1 191 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 ADNP2Q6IQ32 1131 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 ZYG11AQ6WRX3 759 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 ABHD12BQ7Z5M8 362 aaPredicted RBP1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 ZNF547Q8IVP9 402 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 CDKL3Q8IVW4 592 aaPredicted RBP1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 ZNF695Q8IW36 515 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 BBS5Q8N3I7 341 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 OR4M2Q8NGB6 313 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 OR56B2PQ8NGI1 322 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 OR10G4Q8NGN3 311 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 OR2L8Q8NGY9 312 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 OR4S2Q8NH73 311 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 SYNPRQ8TBG9 265 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 GPR151Q8TDV0 419 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 ISOC1Q96CN7 298 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 RASD2Q96D21 266 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 TSNARE1Q96NA8 513 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 OR2A5Q96R48 311 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 MYCBPQ99417 103 aaPredicted RBP1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 NDFIP1Q9BT67 221 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 UVRAGQ9P2Y5 699 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 PITPNC1Q9UKF7 332 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 MYH11P35749 1972 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 PLCE1Q9P212 2302 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 PRR14LQ5THK1 2151 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 EML6Q6ZMW3 1958 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 TRAV39A0A0B4J263 110 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 TRBV11-1A0A0K0K1C0 115 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 GLYATL1P3A0A0U1RQE8 302 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 CLDN34H7C241 214 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 EIF3HO15372 352 aaKnown RBP eCLIP1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 WBP4O75554 376 aaKnown RBP1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 CLPXO76031 633 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 SRP72O76094 671 aaKnown RBP1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 RAB3DO95716 219 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 SERPINA5P05154 406 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 ERCC1P07992 297 aaPredicted RBP1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 PAEPP09466 180 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 TACSTD2P09758 323 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 ACSM4P0C7M7 580 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 AQP2P41181 271 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 SLCO1A2P46721 670 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 CSNK1A1P48729 337 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 MNAT1P51948 309 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 RND2P52198 227 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 SNRPFP62306 86 aaKnown RBP1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 SLC25A11Q02978 314 aaKnown RBP1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 MXD1Q05195 221 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 BSPH1Q075Z2 132 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 XKR7Q5GH72 579 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 TMEM220Q6QAJ8 160 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 PLET1Q6UQ28 207 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 TEX43Q6ZNM6 134 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 Q6ZR03 302 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 RTL4Q6ZR62 310 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 HDDC2Q7Z4H3 204 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 TRAM1L1Q8N609 369 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 FBXL13Q8NEE6 735 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 CREB3L1Q96BA8 519 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 TM4SF18Q96CE8 201 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 CSPG4P5Q96PW8 444 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 DHRS9Q9BPW9 319 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 CHAC1Q9BUX1 264 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 SLC25A2Q9BXI2 301 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 OR51M1Q9H341 326 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 NMRK1Q9NWW6 199 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 YARS2Q9Y2Z4 477 aaKnown RBP1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 CCDC88CQ9P219 2028 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 SPTBP11277 2137 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 CMYA5Q8N3K9 4069 aa1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 YLPM1P49750 1951 aaKnown RBP1.94□□□□□ -2.1
HMGB3P12-201ENST00000438745 ALPK2Q86TB3 2170 aa1.93□□□□□ -2.1
HMGB3P12-201ENST00000438745 MED12Q93074 2177 aa1.93□□□□□ -2.1
HMGB3P12-201ENST00000438745 HEATR5AQ86XA9 2040 aa1.93□□□□□ -2.1
HMGB3P12-201ENST00000438745 DNAJC13O75165 2243 aa1.93□□□□□ -2.1
HMGB3P12-201ENST00000438745 IGHV3-74A0A0B4J1X5 117 aa1.93□□□□□ -2.1
HMGB3P12-201ENST00000438745 A0A0J9YYE9 177 aa1.93□□□□□ -2.1
HMGB3P12-201ENST00000438745 A0A1B0GVX0 72 aa1.93□□□□□ -2.1
HMGB3P12-201ENST00000438745 MGAT4DA6NG13 374 aa1.93□□□□□ -2.1
HMGB3P12-201ENST00000438745 TRIM64CA6NLI5 447 aa1.93□□□□□ -2.1
HMGB3P12-201ENST00000438745 J3QLI3 93 aa1.93□□□□□ -2.1
HMGB3P12-201ENST00000438745 AP3B1O00203 1094 aa1.93□□□□□ -2.1
HMGB3P12-201ENST00000438745 DFFAO00273 331 aa1.93□□□□□ -2.1
HMGB3P12-201ENST00000438745 MRPS12O15235 138 aaKnown RBP1.93□□□□□ -2.1
HMGB3P12-201ENST00000438745 OR2J2O76002 312 aa1.93□□□□□ -2.1
HMGB3P12-201ENST00000438745 TRBC1P01850 177 aa1.93□□□□□ -2.1
HMGB3P12-201ENST00000438745 BCHEP06276 602 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms