RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ERVFC1-1P60608 527 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 HSPE1P61604 102 aaKnown RBP2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 TBPL1P62380 186 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 SLC35A2P78381 396 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 PRDX1Q06830 199 aaKnown RBP2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 PUDPQ08623 228 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 GAGE5Q13069 117 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 GAGE6Q13070 117 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 FASTKQ14296 549 aaKnown RBP2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 ZNF266Q14584 549 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 MLF2Q15773 248 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 GRK1Q15835 563 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 KLF17Q5JT82 389 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 ZNF684Q5T5D7 378 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 LEMD1Q68G75 181 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 TBPL2Q6SJ96 375 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 UNQ9370/PRO34162Q6UXP9 181 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 Q6ZN92 141 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 LRRC28Q86X40 367 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 CARM1Q86X55 608 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 DOLPP1Q86YN1 238 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 OSR2Q8N2R0 312 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 MUC15Q8N387 334 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 CBR4Q8N4T8 237 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 UBAC2Q8NBM4 344 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 ZNF439Q8NDP4 499 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR51S1Q8NGJ8 323 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR2K2Q8NGT1 345 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 ZNRF2Q8NHG8 242 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 NEIL3Q8TAT5 605 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 BLNKQ8WV28 456 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 TMED6Q8WW62 240 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 RXFP2Q8WXD0 754 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 IL22RA2Q969J5 263 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 PLEKHF1Q96S99 279 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 CDX2Q99626 313 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 TCEAL7Q9BRU2 100 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 CCDC32Q9BV29 185 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 RIOK2Q9BVS4 552 aaKnown RBP2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 RSPO3Q9BXY4 272 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 MAP1LC3BQ9GZQ8 125 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR51E2Q9H255 320 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 CALYQ9NYX4 217 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 KCNIP1Q9NZI2 227 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 DNAJC27Q9NZQ0 273 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 SPRR3Q9UBC9 169 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 PYCARDQ9ULZ3 195 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 CUL7Q14999 1698 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 ABCA10Q8WWZ4 1543 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 THOC2Q8NI27 1593 aaKnown RBP2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 KIF1BO60333 1816 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 TARBP1Q13395 1621 aaKnown RBP2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 PIK3C2GO75747 1445 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 NPATQ14207 1427 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 IGLV5-45A0A087WSX0 123 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 A0A087WX48 190 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 IGHV3-20A0A0C4DH32 117 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 PVALEFA0A1B0GWK0 134 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 RBFOX3A6NFN3 312 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 CCDC160A6NGH7 325 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 MSGN1A6NI15 193 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR5H1A6NKK0 313 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 FOXI3A8MTJ6 420 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 E9PLD3 99 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 G3V2L1 256 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 HMGB3O15347 200 aaKnown RBP2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 ZNF207O43670 478 aaKnown RBP2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 RDH16O75452 317 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 GCM2O75603 506 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 YIF1AO95070 293 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 EPPINO95925 133 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 NGFP01138 241 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 IGF2P01344 180 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 EDN1P05305 212 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 EIF4EP06730 217 aaKnown RBP2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR5G3P0C626 314 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 IGHV4-38-2P0DP08 117 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 RCC1P18754 421 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 SERPINB10P48595 397 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 DYNLL1P63167 89 aaKnown RBP2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 RPL36AP83881 106 aaKnown RBP2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 EMX1Q04741 257 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 CDNFQ49AH0 187 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 LAMTOR1Q6IAA8 161 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 DCUN1D2Q6PH85 259 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 CNIH2Q6PI25 160 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 FOXL2NBQ6ZUU3 175 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 NAA40Q86UY6 237 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 UMODL1-AS1Q8N2C9 162 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 NPWQ8N729 165 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR52L1Q8NGH7 329 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR51A2Q8NGJ7 313 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR10G7Q8NGN6 311 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR9I1Q8NGQ6 314 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR4S2Q8NH73 311 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR10D3Q8NH80 312 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 MFSD8Q8NHS3 518 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 C1orf54Q8WWF1 131 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 CYGBQ8WWM9 190 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 CHCHD10Q8WYQ3 142 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms