RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 ZNF121P58317 390 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 UBE2NP61088 152 aaKnown RBP3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 TMEM42Q69YG0 159 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 LYPD2Q6UXB3 125 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 PHF13Q86YI8 300 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 CHST4Q8NCG5 386 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 OR10W1Q8NGF6 305 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 OR51Q1Q8NH59 317 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 STOML3Q8TAV4 291 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 HAVCR2Q8TDQ0 301 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 TM4SF18Q96CE8 201 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 GALNT14Q96FL9 552 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 IMP4Q96G21 291 aaKnown RBP3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 ZNF799Q96GE5 643 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 UBE2E2Q96LR5 201 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 C20orf144Q9BQM9 153 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 ZNF430Q9H8G1 570 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 TMEM9BQ9NQ34 198 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 SLC7A11Q9UPY5 501 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 TP53TG1Q9Y2A0 90 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 CDC42BPBQ9Y5S2 1711 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 KIF24Q5T7B8 1368 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 TET2Q6N021 2002 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 IGHV3-74A0A0B4J1X5 117 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 IGHV3-66A0A0C4DH42 116 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 PLAC8L1A1L4L8 177 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 CLDN24A6NM45 220 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 NCBP2LA6PVI3 153 aaKnown RBP3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 CEACAM18A8MTB9 384 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 TAAR5O14804 337 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 RDH16O75452 317 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 SOX14O95416 240 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 TTC4O95801 387 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 RAB3AP20336 220 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 MDKP21741 143 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 RPL12P30050 165 aaKnown RBP3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 PYCR1P32322 319 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 MPIP34949 423 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 RPS10P46783 165 aaKnown RBP3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 ERFP50548 548 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 SKP2Q13309 424 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 OR2F1Q13607 317 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 FAM53BQ14153 422 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 HIST3H3Q16695 136 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 C4orf26Q17RF5 130 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 CLEC12BQ2HXU8 276 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 TEX30Q5JUR7 227 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 TSPO2Q5TGU0 170 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 OR2T5Q6IEZ7 315 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 NPSR1Q6W5P4 371 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 SLC36A1Q7Z2H8 476 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 DPPA2Q7Z7J5 298 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 RAB43Q86YS6 212 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 SLC30A8Q8IWU4 369 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 SLC34A3Q8N130 599 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 CLDN22Q8N7P3 220 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 OR52E2Q8NGJ4 325 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 OR2T29Q8NH02 315 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 OR10J5Q8NHC4 309 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 ZFAND1Q8TCF1 268 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 TMEM158Q8WZ71 300 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 BORCS5Q969J3 196 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 OR2V2Q96R30 315 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 ZNF2Q9BSG1 426 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 PECRQ9BY49 303 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 TRIM4Q9C037 500 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 BOLA2Q9H3K6 86 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 ZNF331Q9NQX6 463 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 VPS29Q9UBQ0 182 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 RAB22AQ9UL26 194 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 NDRG2Q9UN36 371 aaKnown RBP3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 ST3GAL6Q9Y274 331 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 NDUFAF1Q9Y375 327 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 PIKFYVEQ9Y2I7 2098 aa3.04□□□□□ -1.92
HMGB1P45-201ENST00000435986 WDR62O43379 1518 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 NUP155O75694 1391 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 CENPVL3A0A0U1RRI6 287 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 A0A1B0GVY2 172 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 SYCE1LA8MT33 242 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 TMX2-CTNND1H3BSU7 103 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 PHYHO14832 338 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 CTSLP07711 333 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 CST2P09228 141 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 NBEAP1P0C6P0 100 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 PGA5P0DJD9 388 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 ERGP11308 486 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 PSG2P11465 335 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 CRABP1P29762 137 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 ADORA1P30542 326 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 PFN2P35080 140 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 RPL5P46777 297 aaKnown RBP3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 GABRA4P48169 554 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 P2RX1P51575 399 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 CRYBA4P53673 196 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 RAB25P57735 213 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 SLC35A1P78382 337 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 BTN3A2P78410 334 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 IL5RAQ01344 420 aa3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 FLI1Q01543 452 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P45-201ENST00000435986 ZNF235Q14590 738 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms