RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 DEGS2Q6QHC5 323 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 LIAT1Q6ZQX7 453 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 SLC17A2O00624 439 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 PDCD6O75340 191 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 SLC25A1P53007 311 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 FAM106AQ4KMX7 169 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 C9orf50Q5SZB4 431 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 C1orf185Q5T7R7 199 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 ZNF343Q6P1L6 599 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 MOGAT3Q86VF5 341 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 ZDHHC22Q8N966 263 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 ABHD14AQ9BUJ0 271 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 LRP6O75581 1613 aa9.95□□□□□ -0.82
SCN4A-201ENST00000435607 C3orf85A0A1B0GTC6 90 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 TMEM210A6NLX4 147 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 H3BVH4 76 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 CD3DP04234 171 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 SLC6A1P30531 599 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 MMDQ15546 238 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 INO80CQ6PI98 192 aaPredicted RBP9.94□□□□□ -0.82
SCN4A-201ENST00000435607 KIRREL2Q6UWL6 708 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 MRGPREQ86SM8 312 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 OR2Y1Q8NGV0 311 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 OIT3Q8WWZ8 545 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 IGHV3-43A0A0B4J1X8 118 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 ZNF324O75467 553 aaPredicted RBP9.94□□□□□ -0.82
SCN4A-201ENST00000435607 IGHV3-43DP0DP04 118 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 LRRC75BQ2VPJ9 315 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 ATG101Q9BSB4 218 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 C20orf141Q9NUB4 165 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 TMEM218A2RU14 115 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 SBK3P0C264 359 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 CAMPP49913 170 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 OR1L8Q8NGR8 309 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 RPS4Y2Q8TD47 263 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 MAP6Q96JE9 813 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 HARBI1Q96MB7 349 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 OR2A25A4D2G3 310 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 RNF224P0DH78 156 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 KHDC3LQ587J8 217 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 TMEM191AQ9H0A3 160 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 TMEM238LA0A1B0GVL6 79 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 A6NJY4 79 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 ZNF737O75373 536 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 FAM53AQ6NSI3 398 aaPredicted RBP9.94□□□□□ -0.82
SCN4A-201ENST00000435607 R3HDM4Q96D70 268 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 PARP11Q9NR21 331 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 CACNG5Q9UF02 275 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 CORTO00230 105 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 WDR74Q6RFH5 385 aaPredicted RBP9.94□□□□□ -0.82
SCN4A-201ENST00000435607 PPP1R1CQ8WVI7 109 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 ELOVL1Q9BW60 279 aa9.94□□□□□ -0.82
SCN4A-201ENST00000435607 SF3B5Q9BWJ5 86 aaKnown RBP9.94□□□□□ -0.82
SCN4A-201ENST00000435607 IGHV3OR16-12A0A075B7B8 117 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 IGHV1OR15-9A0A0B4J2B8 117 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 RNASE1P07998 156 aaKnown RBP9.93□□□□□ -0.82
SCN4A-201ENST00000435607 NQO2P16083 231 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 HLA-GP17693 338 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 CDC20Q12834 499 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 HERPUD1Q15011 391 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 LGALSLQ3ZCW2 172 aaPredicted RBP9.93□□□□□ -0.82
SCN4A-201ENST00000435607 TMEM78Q5T7P6 136 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 ZNF519Q8TB69 540 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 GSX2Q9BZM3 304 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 AVPR2P30518 371 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 TSPOP30536 169 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 SLC6A12P48065 614 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 ZMIZ1Q9ULJ6 1067 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 C10orf113Q5VZT2 155 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 C16orf82Q7Z2V1 217 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 SCN11AQ9UI33 1791 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 CD96P40200 585 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 ZNF66Q6ZN08 573 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 IL21Q9HBE4 155 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 SLC25A10Q9UBX3 287 aaPredicted RBP9.93□□□□□ -0.82
SCN4A-201ENST00000435607 CLEC2LP0C7M8 214 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 NUTF2P61970 127 aaKnown RBP9.93□□□□□ -0.82
SCN4A-201ENST00000435607 PRSS36Q5K4E3 855 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 GMPPAQ96IJ6 420 aaPredicted RBP9.93□□□□□ -0.82
SCN4A-201ENST00000435607 CCL19Q99731 98 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 SLC52A3Q9NQ40 469 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 PPIAL4EA0A075B759 164 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 PPIAL4DF5H284 164 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 M0R2Z0 102 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 PPIAL4FP0DN26 164 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 RPS19P39019 145 aaKnown RBP9.93□□□□□ -0.82
SCN4A-201ENST00000435607 DGCR2P98153 550 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 WDR25Q64LD2 544 aaPredicted RBP9.93□□□□□ -0.82
SCN4A-201ENST00000435607 PPIAL4AQ9Y536 164 aa9.93□□□□□ -0.82
SCN4A-201ENST00000435607 ZAR1LA6NP61 321 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 G6PCP35575 357 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 FAM209AQ5JX71 171 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 OR10G4Q8NGN3 311 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 OR10G9Q8NGN4 311 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 OR10G7Q8NGN6 311 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 FAM53CQ9NYF3 392 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 LIPGQ9Y5X9 500 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 TRDCB7Z8K6 153 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 PTHLHP12272 177 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 TEX261Q6UWH6 196 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms