RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 ARGFXA6NJG6 315 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 IFITM10A6NMD0 228 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 FOXI3A8MTJ6 420 aaPredicted RBP7.04□□□□□ -1.28
VTI1A-202ENST00000432306 SEC14L6B5MCN3 397 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 NDUFS6O75380 124 aaKnown RBP7.04□□□□□ -1.28
VTI1A-202ENST00000432306 ADAP1O75689 374 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 EML2O95834 649 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 GPANK1O95872 356 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 NQO2P16083 231 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 RPL12P30050 165 aaKnown RBP7.04□□□□□ -1.28
VTI1A-202ENST00000432306 EIF2B1Q14232 305 aaKnown RBP7.04□□□□□ -1.28
VTI1A-202ENST00000432306 PDGFRLQ15198 375 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 ACKR1Q16570 336 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 ODF4Q2M2E3 257 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 SLC35D2Q76EJ3 337 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 CSNK1A1LQ8N752 337 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 SLC26A10Q8NG04 563 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 OR5T1Q8NG75 326 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 OR51F2Q8NH61 342 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 DOK4Q8TEW6 326 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 SLC25A43Q8WUT9 341 aaPredicted RBP7.04□□□□□ -1.28
VTI1A-202ENST00000432306 RAB1CQ92928 201 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 MUCL1Q96DR8 90 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 BSCL2Q96G97 398 aaPredicted RBP7.04□□□□□ -1.28
VTI1A-202ENST00000432306 GNRHR2Q96P88 292 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 PBDC1Q9BVG4 233 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 OR10A5Q9H207 317 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 C1orf123Q9NWV4 160 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 FAM206AQ9NX38 181 aa7.04□□□□□ -1.28
VTI1A-202ENST00000432306 ITPR1Q14643 2758 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 NBEAQ8NFP9 2946 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 OTOL1A6NHN0 477 aaPredicted RBP7.03□□□□□ -1.28
VTI1A-202ENST00000432306 K7EPK0 472 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 TGOLN2O43493 480 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 TSPAN15O95858 294 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 CSN2P05814 226 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 MMP9P14780 707 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 CTLA4P16410 223 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 P2RY1P47900 373 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 TAS2R46P59540 309 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 RPS23P62266 143 aaKnown RBP7.03□□□□□ -1.28
VTI1A-202ENST00000432306 DEFA6Q01524 100 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 ZP4Q12836 540 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 CLINT1Q14677 625 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 ARL6IP1Q15041 203 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 PCOLCEQ15113 449 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 PRTGQ2VWP7 1150 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 SLC22A6Q4U2R8 563 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 GPR157Q5UAW9 335 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 C1orf140Q5VVS0 124 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 PLCXD3Q63HM9 321 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 RTL6Q6ICC9 239 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 SLC23A3Q6PIS1 610 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 CBLN3Q6UW01 205 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 SHISA5Q8N114 240 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 KCNG3Q8TAE7 436 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 GALNT14Q96FL9 552 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 C14orf144Q96I85 54 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 FANCD2OSQ96PS1 177 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 CCDC3Q9BQI4 270 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 TPSD1Q9BZJ3 242 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 MOB1AQ9H8S9 216 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 OR2S2Q9NQN1 319 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 SIRT7Q9NRC8 400 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 PNO1Q9NRX1 252 aaKnown RBP7.03□□□□□ -1.28
VTI1A-202ENST00000432306 GAR1Q9NY12 217 aaKnown RBP7.03□□□□□ -1.28
VTI1A-202ENST00000432306 COA3Q9Y2R0 106 aaPredicted RBP7.03□□□□□ -1.28
VTI1A-202ENST00000432306 PUS1Q9Y606 427 aaKnown RBP eCLIP7.03□□□□□ -1.28
VTI1A-202ENST00000432306 X6R8D5 127 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 LAMA1P25391 3075 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 KNTC1P50748 2209 aa7.03□□□□□ -1.28
VTI1A-202ENST00000432306 A0A0A6YYD4 124 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 TRAV25A0A0B4J276 109 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 A6NIZ1 184 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 MBD3L5A6NJ08 208 aaPredicted RBP7.02□□□□□ -1.29
VTI1A-202ENST00000432306 A8MVM7 634 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 UMAD1C9J7I0 102 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 SYT7O43581 403 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 SLC16A7O60669 478 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 OR6A2O95222 327 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 WISP1O95388 367 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 IFNA2P01563 188 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 MBP02144 154 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 PMP2P02689 132 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 RNH1P13489 461 aaKnown RBP7.02□□□□□ -1.29
VTI1A-202ENST00000432306 ST6GAL1P15907 406 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 GNB3P16520 340 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 LORP23490 312 aaPredicted RBP7.02□□□□□ -1.29
VTI1A-202ENST00000432306 ACTR1BP42025 376 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 RBP2P50120 134 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 TMEM50BP56557 158 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 TMEM33P57088 247 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 RAB4BP61018 213 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 RAP1BP61224 184 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 RAP1AP62834 184 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 EBPQ15125 230 aaKnown RBP7.02□□□□□ -1.29
VTI1A-202ENST00000432306 MIDNQ504T8 468 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 DNM1P34Q6PK57 102 aa7.02□□□□□ -1.29
VTI1A-202ENST00000432306 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.02□□□□□ -1.29
VTI1A-202ENST00000432306 TMEFF1Q8IYR6 380 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms