RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 POP5Q969H6 163 aaKnown RBP2.79□□□□□ -1.96
PTPN4-204ENST00000431283 YIPF5Q969M3 257 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 SLC35B4Q969S0 331 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 TRIM44Q96DX7 344 aaPredicted RBP2.79□□□□□ -1.96
PTPN4-204ENST00000431283 PPP1R36Q96LQ0 422 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 C16orf45Q96MC5 204 aaPredicted RBP2.79□□□□□ -1.96
PTPN4-204ENST00000431283 CCDC115Q96NT0 180 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 OR2M2Q96R28 347 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 OR52E6Q96RD3 313 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 SLC19A3Q9BZV2 496 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 SLC38A1Q9H2H9 487 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 RMND5AQ9H871 391 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 C12orf10Q9HB07 376 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 BEX1Q9HBH7 125 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 TMEM27Q9HBJ8 222 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 B3GNT2Q9NY97 397 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 UBAP1Q9NZ09 502 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 MYEF2Q9P2K5 600 aaKnown RBP2.79□□□□□ -1.96
PTPN4-204ENST00000431283 NUP50Q9UKX7 468 aa2.79□□□□□ -1.96
PTPN4-204ENST00000431283 ZNF443Q9Y2A4 671 aaPredicted RBP2.79□□□□□ -1.96
PTPN4-204ENST00000431283 HEATR1Q9H583 2144 aaKnown RBP2.78□□□□□ -1.96
PTPN4-204ENST00000431283 IGKV2D-24A0A075B6R9 120 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 A0A087WUJ7 227 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 FTCDNL1E5RQL4 147 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 CLDN34H7C241 214 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 TRAF3IP2O43734 574 aaPredicted RBP2.78□□□□□ -1.96
PTPN4-204ENST00000431283 MGRN1O60291 552 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 SPAG7O75391 227 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 MT-ATP6P00846 226 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 IGHV2-5P01817 119 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 IGHMP01871 453 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 SHBGP04278 402 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 SERPINE1P05121 402 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 BCHEP06276 602 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 BPGMP07738 259 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 IGFBP1P08833 259 aaPredicted RBP2.78□□□□□ -1.96
PTPN4-204ENST00000431283 WNT2P09544 360 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 CCNOP22674 350 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 GABRR1P24046 479 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 GRPRP30550 384 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 APLNRP35414 380 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 GUCA1AP43080 201 aaPredicted RBP2.78□□□□□ -1.96
PTPN4-204ENST00000431283 MAGEB1P43366 347 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 UCP2P55851 309 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 NME5P56597 212 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 DSTNP60981 165 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 HOXC5Q00444 222 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 HSF2Q03933 536 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 ZNF154Q13106 437 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 HERPUD1Q15011 391 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 PRR4Q16378 134 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 LEG1Q6P5S2 330 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 C16orf87Q6PH81 154 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 ARL9Q6T311 187 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 C6orf89Q6UWU4 347 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 BTNL3Q6UXE8 466 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 ZNF836Q6ZNA1 936 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 MSANTD1Q6ZTZ1 278 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 ASRGL1Q7L266 308 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 SLC16A14Q7RTX9 510 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 VRK2Q86Y07 508 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 C1orf174Q8IYL3 243 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 TMEM123Q8N131 208 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 SLC22A24Q8N4F4 322 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 EIF1ADQ8N9N8 165 aaKnown RBP2.78□□□□□ -1.96
PTPN4-204ENST00000431283 OR52E2Q8NGJ4 325 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 OR6X1Q8NH79 312 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 PNPT1Q8TCS8 783 aaKnown RBP2.78□□□□□ -1.96
PTPN4-204ENST00000431283 SRSF12Q8WXF0 261 aaKnown RBP2.78□□□□□ -1.96
PTPN4-204ENST00000431283 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.78□□□□□ -1.96
PTPN4-204ENST00000431283 HIST1H2ACQ93077 130 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 TMIGD2Q96BF3 282 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 LRRC58Q96CX6 371 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 RHOXF2Q9BQY4 288 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 SLC30A2Q9BRI3 323 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 EMC6Q9BV81 110 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 SCRT1Q9BWW7 348 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 HCAR1Q9BXC0 346 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 OR51B6Q9H340 312 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 GLTPQ9NZD2 209 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 SLC17A7Q9P2U7 560 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 OR5V1Q9UGF6 321 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 IL20RAQ9UHF4 553 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 OPN4Q9UHM6 478 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 PURGQ9UJV8 347 aaKnown RBP2.78□□□□□ -1.96
PTPN4-204ENST00000431283 ARFGEF3Q5TH69 2177 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 NOTCH1P46531 2555 aa2.78□□□□□ -1.96
PTPN4-204ENST00000431283 IGLV3-9A0A075B6K5 115 aa2.77□□□□□ -1.97
PTPN4-204ENST00000431283 IGKV2-28A0A075B6P5 120 aa2.77□□□□□ -1.97
PTPN4-204ENST00000431283 A0A1B0GWA3 101 aa2.77□□□□□ -1.97
PTPN4-204ENST00000431283 A0A1W2PRG6 482 aa2.77□□□□□ -1.97
PTPN4-204ENST00000431283 C5orf49A4QMS7 147 aa2.77□□□□□ -1.97
PTPN4-204ENST00000431283 PRORSD1PA6NEY8 169 aa2.77□□□□□ -1.97
PTPN4-204ENST00000431283 OOEPA6NGQ2 149 aa2.77□□□□□ -1.97
PTPN4-204ENST00000431283 TRPC5OSA6NMA1 111 aa2.77□□□□□ -1.97
PTPN4-204ENST00000431283 C11orf98E9PRG8 122 aa2.77□□□□□ -1.97
PTPN4-204ENST00000431283 PLPP3O14495 311 aa2.77□□□□□ -1.97
PTPN4-204ENST00000431283 EI24O14681 340 aa2.77□□□□□ -1.97
PTPN4-204ENST00000431283 BIRC5O15392 142 aa2.77□□□□□ -1.97
PTPN4-204ENST00000431283 RNF13O43567 381 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms