RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 OCSTAMPQ9BR26 566 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 OSBPL10Q9BXB5 764 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 RHOFQ9HBH0 211 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 EXOSC4Q9NPD3 245 aaKnown RBP11.94□□□□□ -0.5
MSH5-208ENST00000429846 TAS2R3Q9NYW6 316 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 DPM3Q9P2X0 92 aa11.94□□□□□ -0.5
MSH5-208ENST00000429846 IGKV1-9A0A0C4DH69 117 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 SH2D1BO14796 132 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 ALX3O95076 343 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 CSN2P05814 226 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 ZNF20P17024 532 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 JUNBP17275 347 aaPredicted RBP11.93□□□□□ -0.5
MSH5-208ENST00000429846 ATF1P18846 271 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 CD33P20138 364 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 CEACAM3P40198 252 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 RASSF2P50749 326 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 ZNF85Q03923 595 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 PDZK1IP1Q13113 114 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 TMEM95Q3KNT9 176 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 HEPN1Q6WQI6 88 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 Q6ZS46 218 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 ABHD12Q8N2K0 398 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 WFDC9Q8NEX5 89 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 OR5AU1Q8NGC0 362 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 OR2G2Q8NGZ5 317 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 CORO2AQ92828 525 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 EME1Q96AY2 570 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 ADAT3Q96EY9 351 aaPredicted RBP11.93□□□□□ -0.5
MSH5-208ENST00000429846 MBOAT4Q96T53 435 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 COMMD4Q9H0A8 199 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 HMG20AQ9NP66 347 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 AURKAIP1Q9NWT8 199 aaPredicted RBP11.93□□□□□ -0.5
MSH5-208ENST00000429846 KIAA2026Q5HYC2 2103 aa11.93□□□□□ -0.5
MSH5-208ENST00000429846 LEUTXA8MZ59 168 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 SIRPB1O00241 398 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 MMP23AO75900 390 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 KDM4BO94953 1096 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 OR2F2O95006 317 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 OR2H2O95918 312 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 OCM2P0CE71 109 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 OCMP0CE72 109 aaPredicted RBP11.92□□□□□ -0.5
MSH5-208ENST00000429846 PF4V1P10720 104 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 CDK2P24941 298 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 LMO1P25800 156 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 DUSP1P28562 367 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 CD34P28906 385 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 TP53I3Q53FA7 332 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 FDX2Q6P4F2 183 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 AMIGO2Q86SJ2 522 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 RDH10Q8IZV5 341 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 CHST4Q8NCG5 386 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 TRUB1Q8WWH5 349 aaKnown RBP11.92□□□□□ -0.5
MSH5-208ENST00000429846 RIBC2Q9H4K1 309 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 NEK6Q9HC98 313 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 GSTK1Q9Y2Q3 226 aa11.92□□□□□ -0.5
MSH5-208ENST00000429846 TSSC4Q9Y5U2 329 aaPredicted RBP11.92□□□□□ -0.5
MSH5-208ENST00000429846 M0QZK8 103 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 IGLV1-47P01700 117 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 MT-ND2P03891 347 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 POLR2IP36954 125 aaKnown RBP11.91□□□□□ -0.5
MSH5-208ENST00000429846 CCR9P51686 369 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 SNU13P55769 128 aaKnown RBP11.91□□□□□ -0.5
MSH5-208ENST00000429846 SLC35A2P78381 396 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 BNIP1Q12981 228 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 HLA-DRB5Q30154 266 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 PRAMEF5Q5TYX0 476 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 C1orf146Q5VVC0 180 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 FOXB2Q5VYV0 432 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 CCDC144NLQ6NUI1 221 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 SAXO1Q8IYX7 474 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 OR4X2Q8NGF9 303 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 STMN2Q93045 179 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 RNF166Q96A37 237 aaPredicted RBP11.91□□□□□ -0.5
MSH5-208ENST00000429846 FGGYQ96C11 551 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 CENPNQ96H22 339 aaPredicted RBP11.91□□□□□ -0.5
MSH5-208ENST00000429846 SLC25A33Q9BSK2 321 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 IMPAD1Q9NX62 359 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 FRRS1LQ9P0K9 344 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 HHLA2Q9UM44 414 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 OAZ3Q9UMX2 235 aa11.91□□□□□ -0.5
MSH5-208ENST00000429846 A0A087X0M5 115 aa11.9□□□□□ -0.5
MSH5-208ENST00000429846 A0A1B0GX30 115 aa11.9□□□□□ -0.5
MSH5-208ENST00000429846 A0A1W2PRX2 142 aa11.9□□□□□ -0.5
MSH5-208ENST00000429846 OOSP1A8MZH6 123 aa11.9□□□□□ -0.5
MSH5-208ENST00000429846 SLC16A6O15403 523 aa11.9□□□□□ -0.5
MSH5-208ENST00000429846 DUS4LO95620 317 aaKnown RBP11.9□□□□□ -0.5
MSH5-208ENST00000429846 PF4P02776 101 aa11.9□□□□□ -0.5
MSH5-208ENST00000429846 RPSAP08865 295 aaKnown RBP11.9□□□□□ -0.5
MSH5-208ENST00000429846 HTR1AP08908 422 aa11.9□□□□□ -0.5
MSH5-208ENST00000429846 ZNF44P15621 663 aa11.9□□□□□ -0.5
MSH5-208ENST00000429846 PTGFRP43088 359 aa11.9□□□□□ -0.5
MSH5-208ENST00000429846 SLC25A30Q5SVS4 291 aa11.9□□□□□ -0.5
MSH5-208ENST00000429846 CENPVQ7Z7K6 275 aaPredicted RBP11.9□□□□□ -0.5
MSH5-208ENST00000429846 OR4D6Q8NGJ1 314 aa11.9□□□□□ -0.5
MSH5-208ENST00000429846 RCC1LQ96I51 464 aaKnown RBP11.9□□□□□ -0.5
MSH5-208ENST00000429846 RBM14Q96PK6 669 aaKnown RBP11.9□□□□□ -0.5
MSH5-208ENST00000429846 MYCBPQ99417 103 aaPredicted RBP11.9□□□□□ -0.5
MSH5-208ENST00000429846 IGKV1-12A0A0C4DH73 117 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 TCRBV4S1A1TA0A5B7 111 aa11.89□□□□□ -0.51
MSH5-208ENST00000429846 DAPL1A0PJW8 107 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms