RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 HPNP05981 417 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 CTLA4P16410 223 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 SHC1P29353 583 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 ALDH3B2P48448 385 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 NCR3LG1Q68D85 454 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 NAA40Q86UY6 237 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 C11orf44Q8N8P7 122 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 OR10P1Q8NGE3 313 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 FLYWCH2Q96CP2 140 aaKnown RBP6.3□□□□□ -1.4
CNOT4-206ENST00000428680 SPOCK3Q9BQ16 436 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 ETV7Q9Y603 341 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 FAM181BA6NEQ2 426 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 A8MV72 311 aaPredicted RBP6.3□□□□□ -1.4
CNOT4-206ENST00000428680 TSPAN15O95858 294 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 ALOX5APP20292 161 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 S100A2P29034 98 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 GABRA6Q16445 453 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 BCDIN3DQ7Z5W3 292 aaKnown RBP6.3□□□□□ -1.4
CNOT4-206ENST00000428680 SPNS2Q8IVW8 549 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 TMEM52Q8NDY8 209 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 ZG16BQ96DA0 208 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 MOGAT1Q96PD6 335 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 SLC29A1Q99808 456 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 ZNF2Q9BSG1 426 aaPredicted RBP6.3□□□□□ -1.4
CNOT4-206ENST00000428680 RALYQ9UKM9 306 aaKnown RBP6.3□□□□□ -1.4
CNOT4-206ENST00000428680 ZNHIT1O43257 154 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 TRAF3IP2O43734 574 aaPredicted RBP6.3□□□□□ -1.4
CNOT4-206ENST00000428680 MRPS14O60783 128 aaKnown RBP6.3□□□□□ -1.4
CNOT4-206ENST00000428680 PRDX2P32119 198 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 ID1P41134 155 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 CA7P43166 264 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 MTNR1BP49286 362 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 KRTAP21-3Q3LHN1 58 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 Q5PR19 223 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 UNQ5815/PRO19632Q6UWF5 114 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 Q6ZS92 163 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 CCDC190Q86UF4 302 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 SYS1Q8N2H4 156 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 OR51A4Q8NGJ6 313 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 OR1K1Q8NGR3 316 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 KCTD12Q96CX2 325 aaKnown RBP6.3□□□□□ -1.4
CNOT4-206ENST00000428680 SSX3Q99909 188 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 PCM1Q15154 2024 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 IGHV3OR16-12A0A075B7B8 117 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 ARPC1BO15143 372 aaKnown RBP6.3□□□□□ -1.4
CNOT4-206ENST00000428680 FABP7O15540 132 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 RP2O75695 350 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 DOC2BQ14184 412 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 KISS1Q15726 138 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 IAH1Q2TAA2 248 aaPredicted RBP6.3□□□□□ -1.4
CNOT4-206ENST00000428680 OR4F17Q8NGA8 305 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 OR4S1Q8NGB4 309 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 OR4F5Q8NH21 305 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 OR4S2Q8NH73 311 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 OR4F4Q96R69 305 aa6.3□□□□□ -1.4
CNOT4-206ENST00000428680 DIMT1Q9UNQ2 313 aaKnown RBP6.3□□□□□ -1.4
CNOT4-206ENST00000428680 TMEM82A0PJX8 343 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 B4DSR2 109 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 DCTN6O00399 190 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 OPN1MWP04001 364 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 OPN1MW2P0DN77 364 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 OPN1MW3P0DN78 364 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 ZNF26P17031 533 aaPredicted RBP6.29□□□□□ -1.4
CNOT4-206ENST00000428680 REG1BP48304 166 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 ZNF674Q2M3X9 581 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 RPEL1Q2QD12 228 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 SLC16A13Q7RTY0 426 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 LRRC28Q86X40 367 aaPredicted RBP6.29□□□□□ -1.4
CNOT4-206ENST00000428680 FUNDC1Q8IVP5 155 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 WDFY1Q8IWB7 410 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 OR8I2Q8N0Y5 310 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 OR5A2Q8NGI9 324 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 ZNF431Q8TF32 576 aaPredicted RBP6.29□□□□□ -1.4
CNOT4-206ENST00000428680 HYLS1Q96M11 299 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 SSBP3Q9BWW4 388 aaPredicted RBP6.29□□□□□ -1.4
CNOT4-206ENST00000428680 PRSS22Q9GZN4 317 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 TMEFF2Q9UIK5 374 aaPredicted RBP6.29□□□□□ -1.4
CNOT4-206ENST00000428680 STARD10Q9Y365 291 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 STRAPQ9Y3F4 350 aaKnown RBP6.29□□□□□ -1.4
CNOT4-206ENST00000428680 HIVEP3Q5T1R4 2406 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 MAGEB4O15481 346 aaPredicted RBP6.29□□□□□ -1.4
CNOT4-206ENST00000428680 TFP02787 698 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 CELA3AP09093 270 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 NKX2-1P43699 371 aaPredicted RBP6.29□□□□□ -1.4
CNOT4-206ENST00000428680 FLI1Q01543 452 aaPredicted RBP6.29□□□□□ -1.4
CNOT4-206ENST00000428680 NSUN5P1Q3KNT7 163 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 UBE2NLQ5JXB2 153 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 AADACL4Q5VUY2 407 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 DGAT2L7PQ6IED9 249 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 OR4D10Q8NGI6 311 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 OR52M1Q8NGK5 317 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 C17orf50Q8WW18 174 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 DDB2Q92466 427 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 HARBI1Q96MB7 349 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 SOX7Q9BT81 388 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 A0A1W2PS29 197 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 ZNF716A6NP11 495 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 F5H697 171 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 MGST3O14880 152 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms