RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 ALPLP05186 524 aa12.43□□□□□ -0.42
SEC13-210ENST00000428626 ERP29P30040 261 aaKnown RBP12.43□□□□□ -0.42
SEC13-210ENST00000428626 GLIPR1P48060 266 aa12.43□□□□□ -0.42
SEC13-210ENST00000428626 FAM220AQ7Z4H9 259 aa12.43□□□□□ -0.42
SEC13-210ENST00000428626 NDUFA11Q86Y39 141 aa12.43□□□□□ -0.42
SEC13-210ENST00000428626 ENTHD1Q8IYW4 607 aa12.43□□□□□ -0.42
SEC13-210ENST00000428626 OR5D18Q8NGL1 313 aa12.43□□□□□ -0.42
SEC13-210ENST00000428626 NDNFQ8TB73 568 aa12.43□□□□□ -0.42
SEC13-210ENST00000428626 PYDC1Q8WXC3 89 aa12.43□□□□□ -0.42
SEC13-210ENST00000428626 RFKQ969G6 155 aa12.43□□□□□ -0.42
SEC13-210ENST00000428626 PELI1Q96FA3 418 aa12.43□□□□□ -0.42
SEC13-210ENST00000428626 OPALINQ96PE5 141 aa12.43□□□□□ -0.42
SEC13-210ENST00000428626 PITPNC1Q9UKF7 332 aa12.43□□□□□ -0.42
SEC13-210ENST00000428626 GSTK1Q9Y2Q3 226 aa12.43□□□□□ -0.42
SEC13-210ENST00000428626 H3BNX3 289 aa12.42□□□□□ -0.42
SEC13-210ENST00000428626 SLC16A6O15403 523 aa12.42□□□□□ -0.42
SEC13-210ENST00000428626 KDM4BO94953 1096 aa12.42□□□□□ -0.42
SEC13-210ENST00000428626 PRKACBP22694 351 aa12.42□□□□□ -0.42
SEC13-210ENST00000428626 CDC42P60953 191 aa12.42□□□□□ -0.42
SEC13-210ENST00000428626 AESQ08117 197 aa12.42□□□□□ -0.42
SEC13-210ENST00000428626 ZIK1Q3SY52 487 aaPredicted RBP12.42□□□□□ -0.42
SEC13-210ENST00000428626 TCTEX1D4Q5JR98 221 aa12.42□□□□□ -0.42
SEC13-210ENST00000428626 SPIN3Q5JUX0 258 aa12.42□□□□□ -0.42
SEC13-210ENST00000428626 Q6P435 159 aa12.42□□□□□ -0.42
SEC13-210ENST00000428626 LHFPL2Q6ZUX7 228 aa12.42□□□□□ -0.42
SEC13-210ENST00000428626 OR13C9Q8NGT0 318 aa12.42□□□□□ -0.42
SEC13-210ENST00000428626 R3HDM4Q96D70 268 aa12.42□□□□□ -0.42
SEC13-210ENST00000428626 COQ2Q96H96 371 aa12.42□□□□□ -0.42
SEC13-210ENST00000428626 HRASLS5Q96KN8 279 aa12.42□□□□□ -0.42
SEC13-210ENST00000428626 UBE2J1Q9Y385 318 aaPredicted RBP12.42□□□□□ -0.42
SEC13-210ENST00000428626 DAPL1A0PJW8 107 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 J3QLW9 94 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 EI24O14681 340 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 IGLV1-47P01700 117 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 ZNF19P17023 458 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 ZNF20P17024 532 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 GABRB1P18505 474 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 CDK2P24941 298 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 LMO1P25800 156 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 HTR1DP28221 377 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 VDAC2P45880 294 aaPredicted RBP12.41□□□□□ -0.42
SEC13-210ENST00000428626 SNRPGP62308 76 aaKnown RBP12.41□□□□□ -0.42
SEC13-210ENST00000428626 CD83Q01151 205 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 SLC25A30Q5SVS4 291 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 C10orf99Q6UWK7 81 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 TRAPPC6BQ86SZ2 158 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 ABHD12Q8N2K0 398 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 DTX3Q8N9I9 347 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 TRUB1Q8WWH5 349 aaKnown RBP12.41□□□□□ -0.42
SEC13-210ENST00000428626 CORO2AQ92828 525 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 SPSB1Q96BD6 273 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 LGALS12Q96DT0 336 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 C4orf36Q96KX1 117 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 ZNF649Q9BS31 505 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 COMMD4Q9H0A8 199 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 ISG20L2Q9H9L3 353 aaKnown RBP12.41□□□□□ -0.42
SEC13-210ENST00000428626 ZNF286AQ9HBT8 521 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 EXOSC4Q9NPD3 245 aaKnown RBP12.41□□□□□ -0.42
SEC13-210ENST00000428626 IMPAD1Q9NX62 359 aa12.41□□□□□ -0.42
SEC13-210ENST00000428626 EXOGQ9Y2C4 368 aaKnown RBP12.41□□□□□ -0.42
SEC13-210ENST00000428626 SH2D7A6NKC9 451 aaPredicted RBP12.4□□□□□ -0.42
SEC13-210ENST00000428626 E9PI62 339 aa12.4□□□□□ -0.42
SEC13-210ENST00000428626 MT-ND2P03891 347 aa12.4□□□□□ -0.42
SEC13-210ENST00000428626 AMY1AP04745 511 aa12.4□□□□□ -0.42
SEC13-210ENST00000428626 AMY2AP04746 511 aa12.4□□□□□ -0.42
SEC13-210ENST00000428626 HTR1AP08908 422 aa12.4□□□□□ -0.42
SEC13-210ENST00000428626 RASSF2P50749 326 aa12.4□□□□□ -0.42
SEC13-210ENST00000428626 CCR9P51686 369 aa12.4□□□□□ -0.42
SEC13-210ENST00000428626 ZP1P60852 638 aa12.4□□□□□ -0.42
SEC13-210ENST00000428626 BDH1Q02338 343 aa12.4□□□□□ -0.42
SEC13-210ENST00000428626 EMX1Q04741 257 aaPredicted RBP12.4□□□□□ -0.42
SEC13-210ENST00000428626 CDK5R1Q15078 307 aa12.4□□□□□ -0.42
SEC13-210ENST00000428626 C17orf58Q2M2W7 97 aa12.4□□□□□ -0.42
SEC13-210ENST00000428626 HEPN1Q6WQI6 88 aa12.4□□□□□ -0.42
SEC13-210ENST00000428626 KCTD20Q7Z5Y7 419 aa12.4□□□□□ -0.42
SEC13-210ENST00000428626 OR13C3Q8NGS6 347 aa12.4□□□□□ -0.42
SEC13-210ENST00000428626 PPIL3Q9H2H8 161 aaKnown RBP12.4□□□□□ -0.42
SEC13-210ENST00000428626 ING3Q9NXR8 418 aa12.4□□□□□ -0.42
SEC13-210ENST00000428626 DPM3Q9P2X0 92 aa12.4□□□□□ -0.42
SEC13-210ENST00000428626 HHLA2Q9UM44 414 aa12.4□□□□□ -0.42
SEC13-210ENST00000428626 MYRFQ9Y2G1 1151 aa12.4□□□□□ -0.42
SEC13-210ENST00000428626 A0A1W2PRX2 142 aa12.39□□□□□ -0.43
SEC13-210ENST00000428626 LY6LH3BQJ8 138 aa12.39□□□□□ -0.43
SEC13-210ENST00000428626 SLC33A1O00400 549 aaPredicted RBP12.39□□□□□ -0.43
SEC13-210ENST00000428626 SH2D1BO14796 132 aa12.39□□□□□ -0.43
SEC13-210ENST00000428626 ATP5HO75947 161 aa12.39□□□□□ -0.43
SEC13-210ENST00000428626 CYB5AP00167 134 aa12.39□□□□□ -0.43
SEC13-210ENST00000428626 CD34P28906 385 aa12.39□□□□□ -0.43
SEC13-210ENST00000428626 SCN1BQ07699 218 aa12.39□□□□□ -0.43
SEC13-210ENST00000428626 ALKBH1Q13686 389 aaKnown RBP12.39□□□□□ -0.43
SEC13-210ENST00000428626 LHFPL3Q86UP9 236 aa12.39□□□□□ -0.43
SEC13-210ENST00000428626 ACBD7Q8N6N7 88 aa12.39□□□□□ -0.43
SEC13-210ENST00000428626 OR5AU1Q8NGC0 362 aa12.39□□□□□ -0.43
SEC13-210ENST00000428626 PHF21AQ96BD5 680 aa12.39□□□□□ -0.43
SEC13-210ENST00000428626 TAS2R3Q9NYW6 316 aa12.39□□□□□ -0.43
SEC13-210ENST00000428626 TRGV10A0A0A0MS01 117 aa12.38□□□□□ -0.43
SEC13-210ENST00000428626 ODAMA1E959 279 aa12.38□□□□□ -0.43
SEC13-210ENST00000428626 XPNPEP2O43895 674 aa12.38□□□□□ -0.43
SEC13-210ENST00000428626 PEX14O75381 377 aa12.38□□□□□ -0.43
SEC13-210ENST00000428626 CGB3P0DN86 165 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms