RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 LCN2P80188 198 aa14.02□□□□□ -0.17
C9orf3-206ENST00000428313 MPV17LQ2QL34 196 aa14.02□□□□□ -0.17
C9orf3-206ENST00000428313 CT45A2Q5DJT8 189 aa14.02□□□□□ -0.17
C9orf3-206ENST00000428313 OR8G2PQ6IF36 304 aa14.02□□□□□ -0.17
C9orf3-206ENST00000428313 GCNT2Q8N0V5 402 aa14.02□□□□□ -0.17
C9orf3-206ENST00000428313 OR2D3Q8NGH3 330 aa14.02□□□□□ -0.17
C9orf3-206ENST00000428313 BTF3L4Q96K17 158 aa14.02□□□□□ -0.17
C9orf3-206ENST00000428313 VAMP8Q9BV40 100 aa14.02□□□□□ -0.17
C9orf3-206ENST00000428313 OR51I2Q9H344 312 aa14.02□□□□□ -0.17
C9orf3-206ENST00000428313 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.02□□□□□ -0.17
C9orf3-206ENST00000428313 GLRX2Q9NS18 164 aa14.02□□□□□ -0.17
C9orf3-206ENST00000428313 HEBP2Q9Y5Z4 205 aa14.02□□□□□ -0.17
C9orf3-206ENST00000428313 PROB1E7EW31 1015 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 NDUFB8O95169 186 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 SEMA4FO95754 770 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 IFNA1P01562 189 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 RUNX1Q01196 453 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 EIF3IQ13347 325 aaKnown RBP14.01□□□□□ -0.17
C9orf3-206ENST00000428313 UBE2V1Q13404 147 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 CD226Q15762 336 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 TCEAL5Q5H9L2 206 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 OGFOD3Q6PK18 319 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 DNM1P34Q6PK57 102 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 PRSS41Q7RTY9 318 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 MRGPRGQ86SM5 289 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 LINC00346Q8IVM7 164 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 SHISA5Q8N114 240 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 SLC39A11Q8N1S5 342 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 GATSQ8NAP1 163 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 ATP5SQ99766 215 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 GABRG3Q99928 467 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 ANXA10Q9UJ72 324 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 CLDN16Q9Y5I7 305 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 TNFSF14O43557 240 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 KBTBD11O94819 623 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 SYNGR4O95473 234 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 TCN2P20062 427 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 NKX2-1P43699 371 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-206ENST00000428313 PAFAH1B2P68402 229 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 TCTN1Q2MV58 587 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 PLPP4Q5VZY2 271 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 CHRDL2Q6WN34 429 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 OR2V1Q8NHB1 315 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 SSC4DQ8WTU2 575 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 ADOQ96SZ5 270 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 SMIM7Q9BQ49 75 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 ALKBH7Q9BT30 221 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-206ENST00000428313 TM2D1Q9BX74 207 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 NKX2-4Q9H2Z4 354 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 ZNF665Q9H7R5 613 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 MOB1AQ9H8S9 216 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 CENPMQ9NSP4 180 aa14.01□□□□□ -0.17
C9orf3-206ENST00000428313 CLEC18AA5D8T8 446 aa14□□□□□ -0.17
C9orf3-206ENST00000428313 CLEC18CQ8NCF0 446 aa14□□□□□ -0.17
C9orf3-206ENST00000428313 THAP10Q9P2Z0 257 aaPredicted RBP14□□□□□ -0.17
C9orf3-206ENST00000428313 EDDM13A0A1B0GTR0 161 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 DXOO77932 396 aaKnown RBP13.99□□□□□ -0.17
C9orf3-206ENST00000428313 DDAH2O95865 285 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 OMGP23515 440 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 RPL23P62829 140 aaKnown RBP13.99□□□□□ -0.17
C9orf3-206ENST00000428313 SRPXP78539 464 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 RASL10BQ96S79 203 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 GPER1Q99527 375 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 SPIN2AQ99865 258 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 SPIN2BQ9BPZ2 258 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 NECAP2Q9NVZ3 263 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 RNF150Q9ULK6 438 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 ATG2AQ2TAZ0 1938 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 CXCL10P02778 98 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 ELAVL3Q14576 367 aaKnown RBP13.99□□□□□ -0.17
C9orf3-206ENST00000428313 KCNIP4Q6PIL6 250 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 SLC38A9Q8NBW4 561 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 SPPL3Q8TCT6 385 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 TOMM40LQ969M1 308 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 DDIT4LQ96D03 193 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 CIB3Q96Q77 187 aaPredicted RBP13.99□□□□□ -0.17
C9orf3-206ENST00000428313 REPIN1Q9BWE0 567 aaKnown RBP13.99□□□□□ -0.17
C9orf3-206ENST00000428313 TMEM9BQ9NQ34 198 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 SLC2A9Q9NRM0 540 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 ZNF581Q9P0T4 197 aa13.99□□□□□ -0.17
C9orf3-206ENST00000428313 CEBPZOSA8MTT3 80 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 CIDEAO60543 219 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 TPPP2P59282 170 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 RPL15P61313 204 aaKnown RBP13.98□□□□□ -0.17
C9orf3-206ENST00000428313 NNATQ16517 81 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 HNRNPA1L2Q32P51 320 aaKnown RBP13.98□□□□□ -0.17
C9orf3-206ENST00000428313 ODF3L1Q8IXM7 274 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 TMEM256Q8N2U0 113 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 ZNF524Q96C55 264 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 WWTR1Q9GZV5 400 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 LIME1Q9H400 295 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 MCTS1Q9ULC4 181 aaKnown RBP13.98□□□□□ -0.17
C9orf3-206ENST00000428313 PAM16Q9Y3D7 125 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 DOCK9Q9BZ29 2069 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 HRKO00198 91 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 LILRA1O75019 489 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 OR5G3P0C626 314 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 CISD3P0C7P0 127 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 SLC6A8P48029 635 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 TDRG1Q3Y452 100 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms