RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 RBM39Q14498 530 aaKnown RBP6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 ZNF146Q15072 292 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 MPPED2Q15777 294 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 ZNF79Q15937 498 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 TAF9Q16594 264 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 ZNF260Q3ZCT1 412 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 CDNFQ49AH0 187 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 SPIN3Q5JUX0 258 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 PRAMEF6Q5VXH4 476 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 DTX2Q86UW9 622 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 MOGAT3Q86VF5 341 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 OR8H2Q8N162 312 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 C19orf18Q8NEA5 215 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 OR4M2Q8NGB6 313 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 ITLN1Q8WWA0 313 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 NEU4Q8WWR8 484 aaPredicted RBP6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 EMG1Q92979 244 aaKnown RBP6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 NEDD4LQ96PU5 975 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 ABHD1Q96SE0 405 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 THAP7Q9BT49 309 aaPredicted RBP6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 KCNK15Q9H427 330 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 AUNIPQ9H7T9 357 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 IFT22Q9H7X7 185 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 UBTD1Q9HAC8 227 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 SAP30LQ9HAJ7 183 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 HES4Q9HCC6 221 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 GCM1Q9NP62 436 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 UFSP2Q9NUQ7 469 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 PLEKHJ1Q9NW61 149 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 BEX4Q9NWD9 120 aaPredicted RBP6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 C1orf123Q9NWV4 160 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 TAS2R8Q9NYW2 309 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 RNF7Q9UBF6 113 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 PPP1R3CQ9UQK1 317 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 NPTNQ9Y639 398 aa6.96□□□□□ -1.3
SMARCAL1-206ENST00000427645 FBN1P35555 2871 aaKnown RBP6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 FN1P02751 2386 aaKnown RBP6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 SRRM5B3KS81 715 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 MCRIP1C9JLW8 97 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 INAFM1C9JVW0 142 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 J3QRK9 145 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 GEMIN2O14893 280 aaKnown RBP6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 DEGS1O15121 323 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 SOCS1O15524 211 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 ECDO95905 644 aaPredicted RBP6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 KNG1P01042 644 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 MUC1P15941 1255 aaPredicted RBP6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 HIST1H1DP16402 221 aaKnown RBP6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 PRKACAP17612 351 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 GABRR1P24046 479 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 LMO1P25800 156 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 CBX5P45973 191 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 PTH2RP49190 550 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 TMEM50BP56557 158 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 DEFA1P59665 94 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 DEFA3P59666 94 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 MRPS11P82912 194 aaKnown RBP6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 MRPS15P82914 257 aaKnown RBP6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 SMIM21Q3B7S5 101 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 MOGAT2Q3SYC2 334 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 SHEQ5VZ18 495 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 TRIQKQ629K1 86 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 C20orf204Q6ZNR8 217 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 DNM1P46Q6ZS02 220 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 SNX29P2Q8IUI4 249 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 DTX3Q8N9I9 347 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 LRRC29Q8WV35 223 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 DEDD2Q8WXF8 326 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 GTF3AQ92664 365 aaKnown RBP6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 COX4I2Q96KJ9 171 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 VRK1Q99986 396 aaPredicted RBP6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 NICN1Q9BSH3 213 aa6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 TRAF4Q9BUZ4 470 aaPredicted RBP6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 RIMS4Q9H426 269 aaPredicted RBP6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 RBFOX1Q9NWB1 397 aaKnown RBP6.95□□□□□ -1.3
SMARCAL1-206ENST00000427645 A0A0A6YYD4 124 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 CENPXA8MT69 81 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 FOXI3A8MTJ6 420 aaPredicted RBP6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 F8VVB4 439 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 F8VWA3 439 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 H7C417 338 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 PDCD6O75340 191 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 OR7C1O76099 320 aaPredicted RBP6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 FSTL3O95633 263 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 CD8AP01732 235 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 LPLP06858 475 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 CSF3P09919 207 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 GNB3P16520 340 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 KCNJ3P48549 501 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 GNG2P59768 71 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 AP3S2P59780 193 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 ACTBP60709 375 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 ACTG1P63261 375 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 IKZF1Q13422 519 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 ARFRP1Q13795 201 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 KCNJ8Q15842 424 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 MICBQ29980 383 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 HFEQ30201 348 aa6.94□□□□□ -1.3
SMARCAL1-206ENST00000427645 PIGYQ3MUY2 71 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms