RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 OR2J1Q9GZK6 312 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 MTCH2Q9Y6C9 303 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 TRAV34A0A0B4J273 112 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 ALG1L2C9J202 215 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 OR2I1PQ8NGU4 316 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 STARD10Q9Y365 291 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 ATG2BQ96BY7 2078 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 SERTM1A2A2V5 107 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 RHBDL1O75783 438 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 AVPR2P30518 371 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 CLEC12BQ2HXU8 276 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 NARFLQ9H6Q4 476 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 SLC25A22Q9H936 323 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 SCN1AP35498 2009 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 TCRBV5S1A1TA0A578 114 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 VDAC1P21796 283 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 RPL34P49207 117 aaKnown RBP12.86□□□□□ -0.35
PTPN13-203ENST00000427191 CEBPDP49716 269 aaPredicted RBP12.86□□□□□ -0.35
PTPN13-203ENST00000427191 CAMPP49913 170 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 LIMK1P53667 647 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 CCSMST1Q4G0I0 132 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 OR1L6Q8NGR2 347 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 OR1N2Q8NGR9 330 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 TMEM70Q9BUB7 260 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 A0A1W2PPC4 97 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 ACTL6AO96019 429 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 OR5AC1P0C628 307 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 B2MP61769 119 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 ZNF273Q14593 569 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 SLC25A42Q86VD7 318 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 FBXL17Q9UF56 701 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 DOCK1Q14185 1865 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 TRGV5A0A0B4J1U4 118 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 A0A1B0GU03 582 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 GFRALQ6UXV0 394 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 BATF2Q8N1L9 274 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 HRO43593 1189 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 SLC25A30Q5SVS4 291 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 LYPD8Q6UX82 237 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 CKAP5Q14008 2032 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 KCNAB1Q14722 419 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 C20orf141Q9NUB4 165 aa12.86□□□□□ -0.35
PTPN13-203ENST00000427191 LMO7DNF2Z398 122 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 IGLV3-27P01718 113 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 KLKB1P03952 638 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 ST3GAL2Q16842 350 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 TEX29Q8N6K0 151 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 SOCS7O14512 581 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 LYZP61626 148 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 SMAD4Q13485 552 aaKnown RBP12.85□□□□□ -0.35
PTPN13-203ENST00000427191 TRILQ7L0X0 811 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 RAB1CQ92928 201 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 MRGPRX1Q96LB2 322 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 TUBGCP6Q96RT7 1819 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 TMEM202A6NGA9 273 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 FOXF1Q12946 379 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 ALKBH3Q96Q83 286 aaPredicted RBP12.85□□□□□ -0.35
PTPN13-203ENST00000427191 SIGLEC7Q9Y286 467 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 DOCK5Q9H7D0 1870 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 SVILO95425 2214 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 IGHV3-20A0A0C4DH32 117 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 TRMT61AQ96FX7 289 aaKnown RBP12.85□□□□□ -0.35
PTPN13-203ENST00000427191 PARP11Q9NR21 331 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 CDS2O95674 445 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 ADIPOQQ15848 244 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 AWAT1Q58HT5 328 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 OR4A47Q6IF82 309 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 KIRREL2Q6UWL6 708 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 TBC1D26Q86UD7 250 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 ZNF275Q9NSD4 429 aaPredicted RBP12.85□□□□□ -0.35
PTPN13-203ENST00000427191 SPNS3Q6ZMD2 512 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 MCHR2Q969V1 340 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 PSG11Q9UQ72 335 aa12.85□□□□□ -0.35
PTPN13-203ENST00000427191 SUCLG1P53597 346 aaKnown RBP12.84□□□□□ -0.35
PTPN13-203ENST00000427191 CST9Q5W186 159 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 MARCH5Q9NX47 278 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 FOCADQ5VW36 1801 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 SRD5A3Q9H8P0 318 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 MYO16Q9Y6X6 1858 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 CRYBB2P43320 205 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 DYNLT3P51808 116 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 TMEM33P57088 247 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 PMCHL1Q16048 86 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 MPV17LQ2QL34 196 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 Q8WTZ3 238 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 PHF7Q9BWX1 381 aaPredicted RBP12.84□□□□□ -0.35
PTPN13-203ENST00000427191 SLC52A3Q9NQ40 469 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 BTAF1O14981 1849 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 GNG7O60262 68 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 SRFP11831 508 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 PPP1CCP36873 323 aaKnown RBP12.84□□□□□ -0.35
PTPN13-203ENST00000427191 ANKRD20A5PA0PJZ0 165 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 ST6GAL1P15907 406 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 CIRBPQ14011 172 aaKnown RBP12.84□□□□□ -0.35
PTPN13-203ENST00000427191 SYT8Q8NBV8 401 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 BVESQ8NE79 360 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 SLC26A1Q9H2B4 701 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 OR4A8P0C604 315 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 SCN2AQ99250 2005 aa12.84□□□□□ -0.35
PTPN13-203ENST00000427191 K7ESM1 405 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms