RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 NKTRP30414 1462 aaKnown RBP2.42□□□□□ -2.02
PMS1-209ENST00000424059 RPRD2Q5VT52 1461 aaKnown RBP2.42□□□□□ -2.02
PMS1-209ENST00000424059 SLIT3O75094 1523 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 ZFYVE16Q7Z3T8 1539 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 KDM5CP41229 1560 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 SIGLEC1Q9BZZ2 1709 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 SIPA1L1O43166 1804 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 FOCADQ5VW36 1801 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 LOC102724200A0A096LPH7 203 aaPredicted RBP2.42□□□□□ -2.02
PMS1-209ENST00000424059 A0A1B0GU03 582 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 SMIM28A0A1B0GU29 152 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 A0A1W2PPK0 400 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 LRP5LA4QPB2 252 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 G3V2L1 256 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 PHF1O43189 567 aaPredicted RBP2.42□□□□□ -2.02
PMS1-209ENST00000424059 OR7C1O76099 320 aaPredicted RBP2.42□□□□□ -2.02
PMS1-209ENST00000424059 RFPL3SP0C7P2 107 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 ADCYAP1P18509 176 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 FCARP24071 287 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 NPY1RP25929 384 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 RPL12P30050 165 aaKnown RBP2.42□□□□□ -2.02
PMS1-209ENST00000424059 SRIP30626 198 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 NTSP30990 170 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 TGFBR1P36897 503 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 POLR2IP36954 125 aaKnown RBP2.42□□□□□ -2.02
PMS1-209ENST00000424059 HCCSP53701 268 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 SLC18A1P54219 525 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 NDUFA6P56556 154 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 TAS2R31P59538 309 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 NCS1P62166 190 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 BTG1P62324 171 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 RPS28P62857 69 aaKnown RBP2.42□□□□□ -2.02
PMS1-209ENST00000424059 EWSR1Q01844 656 aaKnown RBP eCLIP2.42□□□□□ -2.02
PMS1-209ENST00000424059 CRYZQ08257 329 aaKnown RBP2.42□□□□□ -2.02
PMS1-209ENST00000424059 HSD52Q0P140 79 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 FAM53BQ14153 422 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 IL13RA2Q14627 380 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 TRMT12Q53H54 448 aaKnown RBP2.42□□□□□ -2.02
PMS1-209ENST00000424059 ALG10BQ5I7T1 473 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 CLEC12AQ5QGZ9 265 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 SERTAD4-AS1Q5TG53 156 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 ZFAND6Q6FIF0 208 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 UNQ6126/PRO20091Q6UXV3 157 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 ADAMTSL5Q6ZMM2 481 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 ZNF705AQ6ZN79 300 aaPredicted RBP2.42□□□□□ -2.02
PMS1-209ENST00000424059 ABHD12Q8N2K0 398 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 STPG4Q8N801 248 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 C5orf17Q8NAS9 161 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 ZNF439Q8NDP4 499 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 DUSP18Q8NEJ0 188 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 OR7A2PQ8NGA2 310 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 OR1J2Q8NGS2 313 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 OR5B3Q8NH48 314 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 MCFD2Q8NI22 146 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 FNDC9Q8TBE3 224 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 TIMD4Q96H15 378 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 SGK494Q96LW2 274 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 ERMAPQ96PL5 475 aaPredicted RBP2.42□□□□□ -2.02
PMS1-209ENST00000424059 HSPB9Q9BQS6 159 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 CABLES2Q9BTV7 478 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 THTPAQ9BU02 230 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 SEC11CQ9BY50 192 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 OR51I1Q9H343 314 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 RNF167Q9H6Y7 350 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 MAP6D1Q9H9H5 199 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 PLAC1Q9HBJ0 212 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 RETNQ9HD89 108 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 ACKR4Q9NPB9 350 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 SPANXB1Q9NS25 103 aaPredicted RBP2.42□□□□□ -2.02
PMS1-209ENST00000424059 IDI2-AS1Q9NZ38 188 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 THYN1Q9P016 225 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 ZNF629Q9UEG4 869 aaPredicted RBP2.42□□□□□ -2.02
PMS1-209ENST00000424059 TP53TG1Q9Y2A0 90 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 FAM96BQ9Y3D0 163 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 ANKARQ7Z5J8 1434 aa2.42□□□□□ -2.02
PMS1-209ENST00000424059 ZSWIM8A7E2V4 1837 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 CDK5RAP2Q96SN8 1893 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 NSG1A0A0A6YYJ2 146 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 BORCS7-ASMTA0A0B4J1R7 106 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 A0A1B0GUV1 79 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 A0A1B0GX51 115 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 C1orf226A1L170 272 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 TMEM8BA6NDV4 472 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 FABP5P3A8MUU1 101 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 IDSB3KWA1 339 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 H7BYZ3 331 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 SIRPB1O00241 398 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 SAP18O00422 153 aaKnown RBP2.41□□□□□ -2.02
PMS1-209ENST00000424059 ZNF207O43670 478 aaKnown RBP2.41□□□□□ -2.02
PMS1-209ENST00000424059 ZIC3O60481 467 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 AIFM1O95831 613 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 SOD3P08294 240 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 PGAM2P15259 253 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 MGMTP16455 207 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 TCN2P20062 427 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 PSMB1P20618 241 aaKnown RBP2.41□□□□□ -2.02
PMS1-209ENST00000424059 MAOAP21397 527 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 USF1P22415 310 aaPredicted RBP2.41□□□□□ -2.02
PMS1-209ENST00000424059 NMBRP28336 390 aa2.41□□□□□ -2.02
PMS1-209ENST00000424059 AGTR1P30556 359 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms