RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 OR2M7Q8NG81 312 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 RBMXL1Q96E39 390 aaKnown RBP11.53□□□□□ -0.56
MCF2L-213ENST00000421756 EIF5A2Q9GZV4 153 aaKnown RBP11.53□□□□□ -0.56
MCF2L-213ENST00000421756 SH3BGRL3Q9H299 93 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 SLC2A9Q9NRM0 540 aa11.53□□□□□ -0.56
MCF2L-213ENST00000421756 RELNP78509 3460 aa11.52□□□□□ -0.56
MCF2L-213ENST00000421756 ZNF708P17019 499 aa11.52□□□□□ -0.56
MCF2L-213ENST00000421756 GLP1RP43220 463 aa11.52□□□□□ -0.56
MCF2L-213ENST00000421756 CCL11P51671 97 aa11.52□□□□□ -0.56
MCF2L-213ENST00000421756 ERVS71-1P61550 626 aa11.52□□□□□ -0.56
MCF2L-213ENST00000421756 ZNF273Q14593 569 aa11.52□□□□□ -0.56
MCF2L-213ENST00000421756 STK11Q15831 433 aa11.52□□□□□ -0.56
MCF2L-213ENST00000421756 PNLIPRP3Q17RR3 467 aa11.52□□□□□ -0.56
MCF2L-213ENST00000421756 WDR5BQ86VZ2 330 aa11.52□□□□□ -0.56
MCF2L-213ENST00000421756 RNF138Q8WVD3 245 aa11.52□□□□□ -0.56
MCF2L-213ENST00000421756 EXTL1Q92935 676 aa11.52□□□□□ -0.56
MCF2L-213ENST00000421756 HIST1H2AAQ96QV6 131 aa11.52□□□□□ -0.56
MCF2L-213ENST00000421756 NECAP2Q9NVZ3 263 aa11.52□□□□□ -0.56
MCF2L-213ENST00000421756 BOKQ9UMX3 212 aaPredicted RBP11.52□□□□□ -0.56
MCF2L-213ENST00000421756 ANKRD11Q6UB99 2663 aaPredicted RBP11.52□□□□□ -0.56
MCF2L-213ENST00000421756 APOC1P02654 83 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 SERPINA7P05543 415 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 SLC25A4P12235 298 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 IDH3GP51553 393 aaPredicted RBP11.52□□□□□ -0.57
MCF2L-213ENST00000421756 PPA1Q15181 289 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 LTC4SQ16873 150 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 TMEM251Q8N6I4 163 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 CPT1CQ8TCG5 803 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 RNF141Q8WVD5 230 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 SLC5A7Q9GZV3 580 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 BCO1Q9HAY6 547 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 INTS1Q8N201 2190 aaKnown RBP11.52□□□□□ -0.57
MCF2L-213ENST00000421756 COL6A6A6NMZ7 2263 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 FAM24AA6NFZ4 105 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 ATXN7O15265 892 aaPredicted RBP11.52□□□□□ -0.57
MCF2L-213ENST00000421756 LYZL6O75951 148 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 NEURL1O76050 574 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 TPPPO94811 219 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 IGHV3-13P01766 116 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 IGHV3-7P01780 117 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 NAT1P18440 290 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 CCL1P22362 96 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 CRYGSP22914 178 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 NPBWR1P48145 328 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 POLR2GP62487 172 aaKnown RBP eCLIP11.52□□□□□ -0.57
MCF2L-213ENST00000421756 ARG2P78540 354 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 TAGLNQ01995 201 aaKnown RBP11.52□□□□□ -0.57
MCF2L-213ENST00000421756 SSPNQ14714 243 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 PRSS54Q6PEW0 395 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 ARL11Q969Q4 196 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 AKR1E2Q96JD6 320 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 TTTY12Q9BZ98 90 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 ZNF175Q9Y473 711 aa11.52□□□□□ -0.57
MCF2L-213ENST00000421756 HSPA12AO43301 675 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 ATG12O94817 140 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 GRPP07492 148 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 OR8U9P0C7N5 309 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 ICAM2P13598 275 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 ADCYAP1P18509 176 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 PLA2G5P39877 138 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 SPEM2Q0P670 501 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 KCNMB1Q16558 191 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 DCAF10Q5QP82 559 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 HSD17B13Q7Z5P4 300 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-213ENST00000421756 ZNF565Q8N9K5 539 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 OR8U1Q8NH10 309 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 APH1AQ96BI3 265 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 TP53RKQ96S44 253 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 RAB18Q9NP72 206 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 FANCFQ9NPI8 374 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 CYTL1Q9NRR1 136 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 MEMO1Q9Y316 297 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 ARFGEF3Q5TH69 2177 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 SIRPB1O00241 398 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 RHBDL1O75783 438 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 ACTBL2Q562R1 376 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 FAM53AQ6NSI3 398 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-213ENST00000421756 FAM89BQ8N5H3 189 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 CNTNAP3BQ96NU0 1288 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 ZNF286AQ9HBT8 521 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 FBXO7Q9Y3I1 522 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 SSSCA1O60232 199 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 MBPP02686 304 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-213ENST00000421756 CELA3BP08861 270 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 CALCRP30988 508 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 CBX5P45973 191 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 CEBPDP49716 269 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-213ENST00000421756 FOXO1Q12778 655 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 OR4A4PQ8NGN8 299 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 LHFPL5Q8TAF8 219 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 STOML3Q8TAV4 291 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 CD300LFQ8TDQ1 290 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 FAM117AQ9C073 453 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 RHOFQ9HBH0 211 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 MLXQ9UH92 298 aa11.51□□□□□ -0.57
MCF2L-213ENST00000421756 ATRXP46100 2492 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 ZNF816-ZNF321PA0A0X1KG74 233 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 LOC102725191A0A1B0GVB3 256 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 M0R036 132 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 RPS2P15880 293 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms