RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 CD74P04233 296 aa12.99□□□□□ -0.33
AP000550.1-201ENST00000420508 SFTA3P0C7M3 94 aa12.99□□□□□ -0.33
AP000550.1-201ENST00000420508 AGFG1P52594 562 aaKnown RBP12.99□□□□□ -0.33
AP000550.1-201ENST00000420508 TMEM41BQ5BJD5 291 aa12.99□□□□□ -0.33
AP000550.1-201ENST00000420508 FAM219AQ8IW50 185 aa12.99□□□□□ -0.33
AP000550.1-201ENST00000420508 ADGRG7Q96K78 797 aa12.99□□□□□ -0.33
AP000550.1-201ENST00000420508 UQCC1Q9NVA1 299 aa12.99□□□□□ -0.33
AP000550.1-201ENST00000420508 FBXL17Q9UF56 701 aa12.99□□□□□ -0.33
AP000550.1-201ENST00000420508 FNDC1Q4ZHG4 1894 aaPredicted RBP12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 SDHBP21912 280 aa12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 CA6P23280 308 aa12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 FABP6P51161 128 aa12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 SLC25A53Q5H9E4 307 aa12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 SLC36A1Q7Z2H8 476 aa12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 ERRFI1Q9UJM3 462 aaPredicted RBP12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 A0A0J9YW62 118 aa12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 ADAM20O43506 726 aa12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 HYAL3O43820 417 aaPredicted RBP12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 CYTIPO60759 359 aa12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 PPYP01298 95 aa12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 FBXW9Q5XUX1 488 aa12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 TCTEX1D1Q8N7M0 179 aa12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 SOX7Q9BT81 388 aa12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 COMMD5Q9GZQ3 224 aa12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 SLC35B3Q9H1N7 401 aa12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 OOEPA6NGQ2 149 aa12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 GAPDHP04406 335 aaKnown RBP12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 TESK1Q15569 626 aa12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 KCNMB1Q16558 191 aa12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 CACNA1CQ13936 2221 aa12.98□□□□□ -0.33
AP000550.1-201ENST00000420508 TNFSF12O43508 249 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 SP1P08047 785 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 SEC11BP0C7V7 166 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 EGR4Q05215 589 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 FAM162BQ5T6X4 162 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 LRRC75AQ8NAA5 344 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 POM121L2Q96KW2 1035 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 SAMD10Q9BYL1 202 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 LPAR5Q9H1C0 372 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 HOXD4P09016 255 aaPredicted RBP12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 HLA-DRB3P79483 266 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 BPIFCQ8NFQ6 507 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 SDHCQ99643 169 aaPredicted RBP12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 G6PC2Q9NQR9 355 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 NLRC5Q86WI3 1866 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 KNL1Q8NG31 2342 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 IGLV3-12A0A075B6K2 115 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 TXNL1O43396 289 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 ENSAO43768 121 aaKnown RBP12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 CEACAM6P40199 344 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 RBM11P57052 281 aaKnown RBP12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 MIDNQ504T8 468 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 WDR13Q9H1Z4 485 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 PARP11Q9NR21 331 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 A0A1B0GU03 582 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 IAPPP10997 89 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 HAGHQ16775 308 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 NRN1LQ496H8 165 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 KDF1Q8NAX2 398 aaPredicted RBP12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 OR10X1Q8NGY0 326 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 SEC11CQ9BY50 192 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 MAGT1Q9H0U3 335 aa12.97□□□□□ -0.33
AP000550.1-201ENST00000420508 DOCK6Q96HP0 2047 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 TRAF3IP2O43734 574 aaPredicted RBP12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 PNRC1Q12796 327 aaPredicted RBP12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 PCOLCEQ15113 449 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 TUSC5Q8IXB3 177 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 OR51I2Q9H344 312 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 KCNK15Q9H427 330 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 GP6Q9HCN6 339 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 VSIG4Q9Y279 399 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 A0A0U1RQK1 487 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 FGF2P09038 288 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 GLI4P10075 376 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 SLC23A3Q6PIS1 610 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 TMEM54Q969K7 222 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 UCN2Q96RP3 112 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 SPSB2Q99619 263 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 SH3BGRL2Q9UJC5 107 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 ZNF705FA8MVS1 300 aaPredicted RBP12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 HEXAP06865 529 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 ZNF705DP0CH99 300 aaPredicted RBP12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 ZNF705BP0CI00 300 aaPredicted RBP12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 TMEM33P57088 247 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 RNF212Q495C1 297 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 SPINK14Q6IE38 97 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 LCN15Q6UWW0 184 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 BATF2Q8N1L9 274 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 OR8U1Q8NH10 309 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 ZNF385AQ96PM9 386 aaKnown RBP12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 GAL3ST2Q9H3Q3 398 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 SLC2A9Q9NRM0 540 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 LPAR3Q9UBY5 353 aa12.96□□□□□ -0.33
AP000550.1-201ENST00000420508 TMIGD3P0DMS9 266 aaPredicted RBP12.96□□□□□ -0.34
AP000550.1-201ENST00000420508 FGF7P21781 194 aa12.96□□□□□ -0.34
AP000550.1-201ENST00000420508 KLF3P57682 345 aaPredicted RBP12.96□□□□□ -0.34
AP000550.1-201ENST00000420508 EFNB1P98172 346 aa12.96□□□□□ -0.34
AP000550.1-201ENST00000420508 SP6Q3SY56 376 aa12.96□□□□□ -0.34
AP000550.1-201ENST00000420508 LRRC10Q5BKY1 277 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms