RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 GABRA5P31644 462 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 SNU13P55769 128 aaKnown RBP8.9□□□□□ -0.98
SSBP3-206ENST00000420121 P2RX3P56373 397 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 LGALS4P56470 323 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 GRK1Q15835 563 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 PDLIM3Q53GG5 364 aaPredicted RBP8.9□□□□□ -0.98
SSBP3-206ENST00000420121 PLA1AQ53H76 456 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 SPIN3Q5JUX0 258 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 Q6P435 159 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 BAIAP2L2Q6UXY1 529 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 PARP16Q8N5Y8 322 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 OR52I1Q8NGK6 324 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 OR5D18Q8NGL1 313 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 OR13C3Q8NGS6 347 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 OR13D1Q8NGV5 346 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 CFHR4Q92496 578 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 RGP1Q92546 391 aaPredicted RBP8.9□□□□□ -0.98
SSBP3-206ENST00000420121 MALSU1Q96EH3 234 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 ZNF702PQ9H963 129 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 FOXJ3Q9UPW0 622 aa8.9□□□□□ -0.98
SSBP3-206ENST00000420121 IGHV2-26A0A0B4J1V2 119 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 MGST3O14880 152 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 ALX3O95076 343 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 GABRR1P24046 479 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 GDNFP39905 211 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 DYNLT3P51808 116 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 RAB40BQ12829 278 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 IL18R1Q13478 541 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 HERPUD1Q15011 391 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 CDK5R1Q15078 307 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 SSX2Q16385 188 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 SMN1Q16637 294 aaKnown RBP8.89□□□□□ -0.99
SSBP3-206ENST00000420121 XAF1Q6GPH4 301 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 ZNF529Q6P280 563 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 LIAT1Q6ZQX7 453 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 ZBTB49Q6ZSB9 765 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 SAXO1Q8IYX7 474 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 Q8N2B8 174 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 ZNF676Q8N7Q3 588 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 OR4P4Q8NGL7 312 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 OR4C13Q8NGP0 309 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 RPS4Y2Q8TD47 263 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 WIPF2Q8TF74 440 aaPredicted RBP8.89□□□□□ -0.99
SSBP3-206ENST00000420121 FOXRED1Q96CU9 486 aaPredicted RBP8.89□□□□□ -0.99
SSBP3-206ENST00000420121 COQ2Q96H96 371 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 PDCD1LG2Q9BQ51 273 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 JAM3Q9BX67 310 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 TMEM133Q9H2Q1 129 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 ZCCHC4Q9H5U6 513 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 SERTAD4Q9NUC0 356 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 GSTK1Q9Y2Q3 226 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 SESN1Q9Y6P5 492 aa8.89□□□□□ -0.99
SSBP3-206ENST00000420121 A0A0G2JK05 382 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 TMEM212A6NML5 194 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 SNTNA6NMZ2 147 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 MPZL2O60487 215 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 FADS2O95864 444 aaKnown RBP8.88□□□□□ -0.99
SSBP3-206ENST00000420121 CYB5AP00167 134 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 GLIPR1P48060 266 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 GTF2A1P52655 376 aaPredicted RBP8.88□□□□□ -0.99
SSBP3-206ENST00000420121 HABP2Q14520 560 aaPredicted RBP8.88□□□□□ -0.99
SSBP3-206ENST00000420121 FAM189A2Q15884 450 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 FBLN7Q53RD9 439 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 UTF1Q5T230 341 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 MINOS1Q5TGZ0 78 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 Q6ZS46 218 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 TMEM219Q86XT9 240 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 KLHDC1Q8N7A1 406 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 OR51A2Q8NGJ7 313 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 CORO2AQ92828 525 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 Q96MT0 163 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 CDCA4Q9BXL8 241 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 NPFFR1Q9GZQ6 430 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 RAB18Q9NP72 206 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 FGF20Q9NP95 211 aaPredicted RBP8.88□□□□□ -0.99
SSBP3-206ENST00000420121 EXOSC4Q9NPD3 245 aaKnown RBP8.88□□□□□ -0.99
SSBP3-206ENST00000420121 INPP5EQ9NRR6 644 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 UBE2J1Q9Y385 318 aaPredicted RBP8.88□□□□□ -0.99
SSBP3-206ENST00000420121 MINOS1-NBL1R4GNA1 71 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 DNAH3Q8TD57 4116 aa8.88□□□□□ -0.99
SSBP3-206ENST00000420121 FAM90A22PA8MWA6 464 aa8.87□□□□□ -0.99
SSBP3-206ENST00000420121 SLC33A1O00400 549 aaPredicted RBP8.87□□□□□ -0.99
SSBP3-206ENST00000420121 SH2D1BO14796 132 aa8.87□□□□□ -0.99
SSBP3-206ENST00000420121 SULT1B1O43704 296 aa8.87□□□□□ -0.99
SSBP3-206ENST00000420121 IGLV1-47P01700 117 aa8.87□□□□□ -0.99
SSBP3-206ENST00000420121 CSN2P05814 226 aa8.87□□□□□ -0.99
SSBP3-206ENST00000420121 CGB3P0DN86 165 aa8.87□□□□□ -0.99
SSBP3-206ENST00000420121 CGB7P0DN87 165 aa8.87□□□□□ -0.99
SSBP3-206ENST00000420121 AESQ08117 197 aa8.87□□□□□ -0.99
SSBP3-206ENST00000420121 DYNC1I2Q13409 638 aaKnown RBP8.87□□□□□ -0.99
SSBP3-206ENST00000420121 KISS1Q15726 138 aa8.87□□□□□ -0.99
SSBP3-206ENST00000420121 C2orf68Q2NKX9 166 aa8.87□□□□□ -0.99
SSBP3-206ENST00000420121 PRAMEF5Q5TYX0 476 aa8.87□□□□□ -0.99
SSBP3-206ENST00000420121 LPCAT4Q643R3 524 aa8.87□□□□□ -0.99
SSBP3-206ENST00000420121 C11orf88Q6PI97 169 aa8.87□□□□□ -0.99
SSBP3-206ENST00000420121 HEPN1Q6WQI6 88 aa8.87□□□□□ -0.99
SSBP3-206ENST00000420121 SERPINA12Q8IW75 414 aa8.87□□□□□ -0.99
SSBP3-206ENST00000420121 C11orf44Q8N8P7 122 aa8.87□□□□□ -0.99
SSBP3-206ENST00000420121 OR5AK2Q8NH90 309 aa8.87□□□□□ -0.99
SSBP3-206ENST00000420121 OR2T6Q8NHC8 308 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms