RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 SIRPDQ9H106 197 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 DNTTIP1Q9H147 329 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 AMBNQ9NP70 447 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 ESM1Q9NQ30 184 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 NLKQ9UBE8 527 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 RPUSD1Q9UJJ7 312 aaKnown RBP5.7□□□□□ -1.5
HMGN1-205ENST00000419378 POLDIP2Q9Y2S7 368 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 PCDHGB1Q9Y5G3 927 aa5.7□□□□□ -1.5
HMGN1-205ENST00000419378 IGKV1D-17A0A075B6S4 117 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 FAM230AA0A1W2PPH8 454 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 ZNF879B4DU55 563 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 ANKRD65E5RJM6 399 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 TRIM77I1YAP6 450 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 SIGLEC5O15389 551 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 SYNGR1O43759 233 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 WBP4O75554 376 aaKnown RBP5.69□□□□□ -1.5
HMGN1-205ENST00000419378 GATBO75879 557 aaKnown RBP5.69□□□□□ -1.5
HMGN1-205ENST00000419378 CLIC3O95833 236 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 FADS2O95864 444 aaKnown RBP5.69□□□□□ -1.5
HMGN1-205ENST00000419378 ECDO95905 644 aaPredicted RBP5.69□□□□□ -1.5
HMGN1-205ENST00000419378 LIPFP07098 398 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 SFTPBP07988 381 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 HTR1AP08908 422 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 PGA5P0DJD9 388 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 MMP9P14780 707 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 MPZP25189 248 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 RAB40BQ12829 278 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 UBE2V2Q15819 145 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 LRRC36Q1X8D7 754 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 LRRC10Q5BKY1 277 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 RBMS3Q6XE24 437 aaKnown RBP5.69□□□□□ -1.5
HMGN1-205ENST00000419378 ZNF573Q86YE8 665 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 CALHM1Q8IU99 346 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 RDH10Q8IZV5 341 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 SYS1Q8N2H4 156 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 PACRGLQ8N7B6 248 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 SIGLECL1Q8N7X8 197 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 ZDHHC22Q8N966 263 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 OR52I1Q8NGK6 324 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 ZNF671Q8TAW3 534 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 TRMT10AQ8TBZ6 339 aaKnown RBP5.69□□□□□ -1.5
HMGN1-205ENST00000419378 NPRL2Q8WTW4 380 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 MRPL48Q96GC5 212 aaKnown RBP5.69□□□□□ -1.5
HMGN1-205ENST00000419378 MED30Q96HR3 178 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 ZNF488Q96MN9 340 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 ZNF48Q96MX3 618 aaPredicted RBP5.69□□□□□ -1.5
HMGN1-205ENST00000419378 WDFY2Q96P53 400 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 TBX15Q96SF7 602 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 NRIP2Q9BQI9 281 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 ZNF649Q9BS31 505 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 PKIBQ9C010 78 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 ISG20L2Q9H9L3 353 aaKnown RBP5.69□□□□□ -1.5
HMGN1-205ENST00000419378 C8orf4Q9NR00 106 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 INPP5EQ9NRR6 644 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 ZNF222Q9UK12 451 aa5.69□□□□□ -1.5
HMGN1-205ENST00000419378 RPL36Q9Y3U8 105 aaKnown RBP5.69□□□□□ -1.5
HMGN1-205ENST00000419378 SOX21Q9Y651 276 aaPredicted RBP5.69□□□□□ -1.5
HMGN1-205ENST00000419378 FBN3Q75N90 2809 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 IGKV1-27A0A075B6S5 117 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 MDFIC2A0A1B0GVS7 189 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 DNAJC9-AS1A6NH13 148 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 OR4C45A6NMZ5 311 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 J3QLW9 94 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 NOS1APO75052 506 aaPredicted RBP5.68□□□□□ -1.5
HMGN1-205ENST00000419378 ISG15P05161 165 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 ACAA1P09110 424 aaPredicted RBP5.68□□□□□ -1.5
HMGN1-205ENST00000419378 PSG2P11465 335 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 ZNF19P17023 458 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 GABRA2P47869 451 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 CCR9P51686 369 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 ARF6P62330 175 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 UBA52P62987 128 aaKnown RBP5.68□□□□□ -1.5
HMGN1-205ENST00000419378 ACTG1P63261 375 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 IL24Q13007 206 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 SMN1Q16637 294 aaKnown RBP5.68□□□□□ -1.5
HMGN1-205ENST00000419378 SMIM21Q3B7S5 101 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 GPR157Q5UAW9 335 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 ZNF691Q5VV52 312 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 TMEM244Q5VVB8 128 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 METTL11BQ5VVY1 283 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 RUSC1-AS1Q66K80 236 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 BRD3OSQ6XYD6 125 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 ACP7Q6ZNF0 438 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 LHFPL3Q86UP9 236 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 ANGPTL5Q86XS5 388 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 BATF2Q8N1L9 274 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 CD177Q8N6Q3 437 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 ZNRF1Q8ND25 227 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 LY6G5BQ8NDX9 201 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 OR51A4Q8NGJ6 313 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 OR10AC1Q8NH08 325 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 C8orf46Q8TAG6 207 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 CNIH3Q8TBE1 160 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 FAM216AQ8WUB2 273 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 CYGBQ8WWM9 190 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 PP6455Q8WZ26 134 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 H1FXQ92522 213 aaKnown RBP5.68□□□□□ -1.5
HMGN1-205ENST00000419378 NPIPB3Q92617 1050 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 C10orf35Q96D05 121 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 ADAT3Q96EY9 351 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms