RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 H7C1Q1 480 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 CDIPTO14735 213 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 PLA2G10O15496 165 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 SPRY3O43610 288 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 SSX4O60224 188 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 PTBP3O95758 552 aaKnown RBP5.05□□□□□ -1.6
HMGB3-202ENST00000419110 KNG1P01042 644 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 IGHV1-46P01743 117 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 IFNA6P05013 189 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 CD55P08174 381 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 ADH4P08319 380 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 FUT3P21217 361 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 SERPINF1P36955 418 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 PMELP40967 661 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 GLP1RP43220 463 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 KIR2DL3P43628 341 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 GATA4P43694 442 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 NPBWR2P48146 333 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 RFX2P48378 723 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 KCNJ3P48549 501 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 EFNB3Q15768 340 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 IGFBP7Q16270 282 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 MSMPQ1L6U9 139 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 CHRFAM7AQ494W8 412 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 FAM76BQ5HYJ3 339 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 PLAC9Q5JTB6 97 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 WDR82Q6UXN9 313 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 ZNF782Q6ZMW2 699 aaPredicted RBP5.05□□□□□ -1.6
HMGB3-202ENST00000419110 DNM1P46Q6ZS02 220 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 C6orf201Q7Z4U5 140 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 MOGAT3Q86VF5 341 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 LRP11Q86VZ4 500 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 TMEM17Q86X19 198 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 FAM90A1Q86YD7 464 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 DMRTC2Q8IXT2 367 aaPredicted RBP5.05□□□□□ -1.6
HMGB3-202ENST00000419110 C1orf87Q8N0U7 546 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 LINC01560Q8TB33 94 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 GTF3AQ92664 365 aaKnown RBP5.05□□□□□ -1.6
HMGB3-202ENST00000419110 FBXW5Q969U6 566 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 ERGIC1Q969X5 290 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 DACT3Q96B18 629 aaPredicted RBP5.05□□□□□ -1.6
HMGB3-202ENST00000419110 ZNF488Q96MN9 340 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 DHRS9Q9BPW9 319 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 IFT22Q9H7X7 185 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 HRASLSQ9HDD0 168 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 NUDT15Q9NV35 164 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 C1orf123Q9NWV4 160 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 MTCH1Q9NZJ7 389 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 NLKQ9UBE8 527 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 DNAJB11Q9UBS4 358 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 KLK11Q9UBX7 282 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 OR14J1Q9UGF5 321 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 IL19Q9UHD0 177 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 AK3Q9UIJ7 227 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 SCP2D1Q9UJQ7 156 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 EDARQ9UNE0 448 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 CFAP46Q8IYW2 2715 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 MYO18BQ8IUG5 2567 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 ROS1P08922 2347 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 IGHV3-64DA0A0J9YX35 117 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 KIR2DS1A0A191URI9 304 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 C17orf100A8MU93 164 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 DEFB108AA8MXU0 73 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 SRRM5B3KS81 715 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 MCRIP1C9JLW8 97 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 IFNL4K9M1U5 179 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 SIRPB1O00241 398 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 HSPB6O14558 160 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 SH2D1BO14796 132 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 DEGS1O15121 323 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 SSX5O60225 188 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 PRAF2O60831 178 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 NOS1APO75052 506 aaPredicted RBP5.04□□□□□ -1.6
HMGB3-202ENST00000419110 RHBDL1O75783 438 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 HAND1O96004 215 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 DHFRP00374 187 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 CD74P04233 296 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 CD3DP04234 171 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 PRB1P04280 392 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 GLAP06280 429 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 FCGR3AP08637 254 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 ACAA1P09110 424 aaPredicted RBP5.04□□□□□ -1.6
HMGB3-202ENST00000419110 SPNP16150 400 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 GIFP27352 417 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 HLA-DMAP28067 261 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 SLC6A1P30531 599 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 APOBEC3AP31941 199 aaPredicted RBP5.04□□□□□ -1.6
HMGB3-202ENST00000419110 BTCP35070 178 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 HRH1P35367 487 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 ECI1P42126 302 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 KIR2DS4P43632 304 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 OR3A3P47888 321 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 PPOXP50336 477 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 GMFBP60983 142 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 SNTB1Q13884 538 aaKnown RBP5.04□□□□□ -1.6
HMGB3-202ENST00000419110 KIR2DS1Q14954 304 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 CDSNQ15517 529 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 ZNF672Q499Z4 452 aaPredicted RBP5.04□□□□□ -1.6
HMGB3-202ENST00000419110 SAMD5Q5TGI4 173 aa5.04□□□□□ -1.6
HMGB3-202ENST00000419110 SHEQ5VZ18 495 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms