RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 PXT1Q8NFP0 134 aa16.78■□□□□ 0.28
PKNOX1-202ENST00000418336 CHST6Q9GZX3 395 aa16.78■□□□□ 0.28
PKNOX1-202ENST00000418336 C1RLQ9NZP8 487 aa16.78■□□□□ 0.28
PKNOX1-202ENST00000418336 LSM2Q9Y333 95 aaKnown RBP16.78■□□□□ 0.28
PKNOX1-202ENST00000418336 ERICH4A6NGS2 130 aa16.77■□□□□ 0.28
PKNOX1-202ENST00000418336 CD1AP06126 327 aa16.77■□□□□ 0.28
PKNOX1-202ENST00000418336 HCKP08631 526 aa16.77■□□□□ 0.28
PKNOX1-202ENST00000418336 SNU13P55769 128 aaKnown RBP16.77■□□□□ 0.28
PKNOX1-202ENST00000418336 MEF2CQ06413 473 aaPredicted RBP16.77■□□□□ 0.28
PKNOX1-202ENST00000418336 MIDNQ504T8 468 aa16.77■□□□□ 0.28
PKNOX1-202ENST00000418336 C6orf141Q5SZD1 244 aa16.77■□□□□ 0.28
PKNOX1-202ENST00000418336 FIP1L1Q6UN15 594 aaKnown RBP16.77■□□□□ 0.28
PKNOX1-202ENST00000418336 LYPD6Q86Y78 171 aa16.77■□□□□ 0.28
PKNOX1-202ENST00000418336 TBC1D15Q8TC07 691 aa16.77■□□□□ 0.28
PKNOX1-202ENST00000418336 TNFRSF19Q9NS68 423 aa16.77■□□□□ 0.28
PKNOX1-202ENST00000418336 GSTK1Q9Y2Q3 226 aa16.77■□□□□ 0.28
PKNOX1-202ENST00000418336 TRAV8-7A0A075B6U6 113 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 A0A0G2JK05 382 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 FAM90A8PA6NJQ4 464 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 ODF3BA8MYP8 253 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 SLC33A1O00400 549 aaPredicted RBP16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 CYB5AP00167 134 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 RBP4P02753 201 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 CDK1P06493 297 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 OCM2P0CE71 109 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 FSTP19883 344 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 ERP29P30040 261 aaKnown RBP16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 BMXP51813 675 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 WNT4P56705 351 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 FOXL1Q12952 345 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 BLMHQ13867 455 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 IRF3Q14653 427 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 GRK1Q15835 563 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 YIF1BQ5BJH7 314 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 OR51T1Q8NGJ9 327 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 MEGF9Q9H1U4 602 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 VCXQ9H320 206 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 ZNF581Q9P0T4 197 aa16.76■□□□□ 0.27
PKNOX1-202ENST00000418336 MEIOCA2RUB1 952 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 SIRPB1O00241 398 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 MGST3O14880 152 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 PIN1P1O15428 100 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 MMP23AO75900 390 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 FBP1P09467 338 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 ZNF728P0DKX0 622 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 MDKP21741 143 aaPredicted RBP16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 GABRR1P24046 479 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 PAX6P26367 422 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 OR3A4PP47883 348 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 EDDM3BP56851 147 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 Q499Y3 187 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 ZNF782Q6ZMW2 699 aaPredicted RBP16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 GDPD3Q7L5L3 318 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 BEND2Q8NDZ0 799 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 COQ2Q96H96 371 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 ZNF747Q9BV97 191 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 CDCA4Q9BXL8 241 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 ANKRD60Q9BZ19 345 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 EXOSC4Q9NPD3 245 aaKnown RBP16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 SF3B6Q9Y3B4 125 aaKnown RBP16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 MMP24Q9Y5R2 645 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 LINC00312Q9Y6C7 94 aa16.75■□□□□ 0.27
PKNOX1-202ENST00000418336 SH2D1BO14796 132 aa16.74■□□□□ 0.27
PKNOX1-202ENST00000418336 NDUFA7O95182 113 aa16.74■□□□□ 0.27
PKNOX1-202ENST00000418336 CSN2P05814 226 aa16.74■□□□□ 0.27
PKNOX1-202ENST00000418336 IGHV1-8P0DP01 117 aa16.74■□□□□ 0.27
PKNOX1-202ENST00000418336 TMEM225BP0DP42 221 aa16.74■□□□□ 0.27
PKNOX1-202ENST00000418336 MYF6P23409 242 aa16.74■□□□□ 0.27
PKNOX1-202ENST00000418336 OMGP23515 440 aa16.74■□□□□ 0.27
PKNOX1-202ENST00000418336 EEF1B2P24534 225 aaKnown RBP16.74■□□□□ 0.27
PKNOX1-202ENST00000418336 MTNR1BP49286 362 aa16.74■□□□□ 0.27
PKNOX1-202ENST00000418336 GP2P55259 537 aaKnown RBP16.74■□□□□ 0.27
PKNOX1-202ENST00000418336 P2RX3P56373 397 aa16.74■□□□□ 0.27
PKNOX1-202ENST00000418336 SLC35A2P78381 396 aa16.74■□□□□ 0.27
PKNOX1-202ENST00000418336 EDDM3AQ14507 147 aa16.74■□□□□ 0.27
PKNOX1-202ENST00000418336 DYNAPQ8N1N2 210 aa16.74■□□□□ 0.27
PKNOX1-202ENST00000418336 PIFOQ8TCI5 191 aa16.74■□□□□ 0.27
PKNOX1-202ENST00000418336 DYRK2Q92630 601 aa16.74■□□□□ 0.27
PKNOX1-202ENST00000418336 CHCHD3Q9NX63 227 aaKnown RBP16.74■□□□□ 0.27
PKNOX1-202ENST00000418336 PCDHGB5Q9Y5G0 923 aa16.74■□□□□ 0.27
PKNOX1-202ENST00000418336 A0A1W2PPH5 198 aa16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 GPR137BO60478 399 aa16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 CD2P06729 351 aa16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 OCMP0CE72 109 aaPredicted RBP16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 TAS2R43P59537 309 aa16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 RPL15P61313 204 aaKnown RBP16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 MED21Q13503 144 aa16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 LHFPL4Q7Z7J7 247 aa16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 STX19Q8N4C7 294 aa16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 OR11H6Q8NGC7 330 aa16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 TNFAIP8L1Q8WVP5 186 aa16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 CORO2AQ92828 525 aa16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 ZNF714Q96N38 554 aa16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 OR14A2Q96R54 314 aa16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 OR5M11Q96RB7 305 aa16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 DUSP21Q9H596 190 aa16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 HEXA-AS1Q9H8Q6 139 aa16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 NEK6Q9HC98 313 aa16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 TMEM138Q9NPI0 162 aa16.73■□□□□ 0.27
PKNOX1-202ENST00000418336 IL36GQ9NZH8 169 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms