RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDNF-208	ENST00000418212	CLDN23	Q96B33	292 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	RPUSD4	Q96CM3	377 aa	Known RBP	11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	PSENEN	Q9NZ42	101 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	TTR	P02766	147 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	OR5G3	P0C626	314 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	PSMB3	P49720	205 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	OR2W3	Q7Z3T1	314 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	C17orf78	Q8N4C9	275 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	ADIPOR1	Q96A54	375 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	UHRF2	Q96PU4	802 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	SF3B5	Q9BWJ5	86 aa	Known RBP	11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	PLEKHA2	Q9HB19	425 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	TMEM30CP	A0ZSE6	113 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	GPR37	O15354	613 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	TMEM127	O75204	238 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	ZIC2	O95409	532 aa	Predicted RBP	11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	OPN1MW	P04001	364 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	OR5AC1	P0C628	307 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	OPN1MW2	P0DN77	364 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	OPN1MW3	P0DN78	364 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	KIR3DL2	P43630	455 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	CLEC9A	Q6UXN8	241 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	CBLN2	Q8IUK8	224 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	TMEM251	Q8N6I4	163 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	OIT3	Q8WWZ8	545 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	HGD	Q93099	445 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	C14orf79	Q96F83	325 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	CMTM3	Q96MX0	182 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	MED9	Q9NWA0	146 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	TAAR3P	Q9P1P4	343 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	MIOX	Q9UGB7	285 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	TRGV10	A0A0A0MS01	117 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	TRBV23-1	A0A0A0MS06	115 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	TRIM77	I1YAP6	450 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	SP1	P08047	785 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	TNFRSF1A	P19438	455 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	AKR1C3	P42330	323 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	PIGY	Q3MUY2	71 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	STPG2	Q8N412	459 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	POC1B	Q8TC44	478 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	RXFP4	Q8TDU9	374 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	PRRX2	Q99811	253 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	MRPS18A	Q9NVS2	196 aa	Known RBP	11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	STRAP	Q9Y3F4	350 aa	Known RBP	11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	LINC00587	B1AMM8	73 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	S100A8	P05109	93 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	FPR2	P25090	351 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	GNB2	P62879	340 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	RPL11	P62913	178 aa	Known RBP	11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	TVP23C	Q96ET8	276 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	SAMD10	Q9BYL1	202 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	RCL1	Q9Y2P8	373 aa	Known RBP	11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	TP53BP1	Q12888	1972 aa	Predicted RBP	11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	C9orf170	A2RU37	121 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	FCGR3B	O75015	233 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	SEMA7A	O75326	666 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	SPINK9	Q5DT21	86 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	BPIFC	Q8NFQ6	507 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	ADGRG7	Q96K78	797 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	HDHD3	Q9BSH5	251 aa	Predicted RBP	11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	TMEM38B	Q9NVV0	291 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	DSPP	Q9NZW4	1301 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	RFPL4A	A6NLU0	287 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	RFPL4AL1	F8VTS6	287 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	OR7C2	O60412	319 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	FTH1P19	P0C7X4	201 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	SLC39A7	Q92504	469 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	TTTY12	Q9BZ98	90 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	OR2H1	Q9GZK4	316 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	HIF1AN	Q9NWT6	349 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	PPP1R14D	Q9NXH3	145 aa		11.61	□□□□□ -0.55
BDNF-208	ENST00000418212	LSM2	Q9Y333	95 aa	Known RBP	11.61	□□□□□ -0.55
BDNF-208	ENST00000418212		B4E171	279 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	TGFBR3L	H3BV60	316 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	LMX1B	O60663	402 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	TSPAN7	P41732	249 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	FHL5	Q5TD97	284 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	CDCP2	Q5VXM1	449 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	RPUSD3	Q6P087	351 aa	Known RBP	11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	TMEM108	Q6UXF1	575 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	ZDHHC22	Q8N966	263 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	BORCS7	Q96B45	105 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	ZNF488	Q96MN9	340 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	GPR27	Q9NS67	375 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	ANXA10	Q9UJ72	324 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212		A0A1W2PRD5	423 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212		A0A1W2PRF3	423 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212		A0A1W2PRM7	423 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	LNP1	A1A4G5	178 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	TAAR5	O14804	337 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	DTYMK	P23919	212 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	RSPO4	Q2I0M5	234 aa	Predicted RBP	11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	TMEM104	Q8NE00	496 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	OR6S1	Q8NH40	331 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	PPP1R3E	Q9H7J1	279 aa		11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	PATZ1	Q9HBE1	687 aa	Known RBP	11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	PHF3	Q92576	2039 aa	Known RBP	11.6	□□□□□ -0.55
BDNF-208	ENST00000418212	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.6	□□□□□ -0.55
BDNF-208	ENST00000418212		A0A1W2PPH5	198 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms