RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 FBXW12Q6X9E4 464 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 LYZL2Q7Z4W2 148 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 HSD17B11Q8NBQ5 300 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 OR52M1Q8NGK5 317 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 TCEAL3Q969E4 200 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 TOMM40LQ969M1 308 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 JSRP1Q96MG2 331 aaPredicted RBP8.49□□□□□ -1.05
CD44-206ENST00000415148 UCN2Q96RP3 112 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 PROK2Q9HC23 129 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 SLC2A9Q9NRM0 540 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 PTRH2Q9Y3E5 179 aaKnown RBP8.49□□□□□ -1.05
CD44-206ENST00000415148 CELSR3Q9NYQ7 3312 aa8.49□□□□□ -1.05
CD44-206ENST00000415148 NSG1A0A0A6YYJ2 146 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 OR6C6A6NF89 314 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 SPRY1O43609 319 aaPredicted RBP8.48□□□□□ -1.05
CD44-206ENST00000415148 ANGPTL7O43827 346 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 CDS2O95674 445 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 S100A9P06702 114 aaKnown RBP8.48□□□□□ -1.05
CD44-206ENST00000415148 MAS1LP35410 378 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 GLP1RP43220 463 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 RAC3P60763 192 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 GNMTQ14749 295 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 C9orf152Q5JTZ5 239 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 NAXEQ8NCW5 288 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 OR8G5Q8NG78 346 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 OR10AD1Q8NGE0 317 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 CD300LFQ8TDQ1 290 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 MALSU1Q96EH3 234 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 ABHD14BQ96IU4 210 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 OR51M1Q9H341 326 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 DKKL1Q9UK85 242 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 SLC7A11Q9UPY5 501 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 CABIN1Q9Y6J0 2220 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 IGHV3-15A0A0B4J1V0 119 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 LY6G6EA0A0G2JKS1 128 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 A0A0J9YW62 118 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 GPR37O15354 613 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 PDCD6O75340 191 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 TCN2P20062 427 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 EPHA8P29322 1005 aaPredicted RBP8.48□□□□□ -1.05
CD44-206ENST00000415148 SSR4P51571 173 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 MALLQ13021 153 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 SLC22A25Q6T423 547 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 Q6ZS49 121 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 OR4D5Q8NGN0 318 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 OR11L1Q8NGX0 322 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 YPEL4Q96NS1 127 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 TCEAL7Q9BRU2 100 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 SLC35B3Q9H1N7 401 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 TMEM38BQ9NVV0 291 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 U3KQA8 63 aa8.48□□□□□ -1.05
CD44-206ENST00000415148 FAM90A10PA6NDY2 464 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 FAM90A18PA6NE21 464 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 FAM90A16PA6NEW6 464 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 FAM90A20PA6NIJ5 464 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 FAM90A8PA6NJQ4 464 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 FAM90A7PA6NKC0 464 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 FAM90A22PA8MWA6 464 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 FAM90A12PA8MX19 464 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 FAM90A5PA8MXJ8 464 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 FAM90A23PA8MXZ1 464 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 GEMIN2O14893 280 aaKnown RBP8.47□□□□□ -1.05
CD44-206ENST00000415148 LCATP04180 440 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 FBP1P09467 338 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 FAM90A15PP0C7V4 464 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 FAM90A13PP0C7W8 464 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 FAM90A14PP0C7W9 464 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 FAM90A24PP0C7X0 464 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 CCL3P10147 92 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 PCBD1P61457 104 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 RPS23P62266 143 aaKnown RBP8.47□□□□□ -1.05
CD44-206ENST00000415148 PDCD1Q15116 288 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 HAGHQ16775 308 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 PHLDA2Q53GA4 152 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 ZNF343Q6P1L6 599 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 OR1J1Q8NGS3 322 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 KCNE4Q8WWG9 221 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 ST3GAL6Q9Y274 331 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 MMP24Q9Y5R2 645 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 CCDC187A0A096LP49 1063 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 BTBD17A6NE02 478 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 TNFSF11O14788 317 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 PRH1P02810 166 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 FUT3P21217 361 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 FXYD4P59646 89 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 HERV-K104P61576 105 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 ZNF266Q14584 549 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 TMEM182Q6ZP80 229 aaPredicted RBP8.47□□□□□ -1.05
CD44-206ENST00000415148 Q6ZPA2 131 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 FBXL14Q8N1E6 418 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 Q8NFD4 153 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 OR2AE1Q8NHA4 323 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 ZNF837Q96EG3 531 aaPredicted RBP8.47□□□□□ -1.05
CD44-206ENST00000415148 C11orf1Q9H5F2 150 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 KCNJ16Q9NPI9 418 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 FAM86C1Q9NVL1 165 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 WNT16Q9UBV4 365 aa8.47□□□□□ -1.05
CD44-206ENST00000415148 PUS1Q9Y606 427 aaKnown RBP eCLIP8.47□□□□□ -1.05
CD44-206ENST00000415148 SDK2Q58EX2 2172 aa8.46□□□□□ -1.05
CD44-206ENST00000415148 IGKV1-12A0A0C4DH73 117 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms