RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 DEFB109BQ30KR1 87 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 ACTL10Q5JWF8 245 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 FAM151BQ6UXP7 276 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 CASP12Q6UXS9 341 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 CERS6Q6ZMG9 384 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 LHFPL3Q86UP9 236 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 GID4Q8IVV7 300 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 C10orf67Q8IYJ2 551 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 JAGN1Q8N5M9 183 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 OR5K2Q8NHB8 316 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 BMFQ96LC9 184 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 SMIM14Q96QK8 99 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 CTRCQ99895 268 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 HEXA-AS1Q9H8Q6 139 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 POPDC3Q9HBV1 291 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 VCX3AQ9NNX9 186 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 RP1P56715 2156 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 FLNCQ14315 2725 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 IGLV7-46A0A075B6I9 117 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 IGHV3OR16-12A0A075B7B8 117 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 IGHV5-10-1A0A0J9YXX1 117 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 A0A1B0GU03 582 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 TSPAN11A1L157 253 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 GCM2O75603 506 aaPredicted RBP1.99□□□□□ -2.09
MCF2-204ENST00000414978 UGT2B17O75795 530 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 NTN1O95631 604 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 AIFM1O95831 613 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 FADS2O95864 444 aaKnown RBP1.99□□□□□ -2.09
MCF2-204ENST00000414978 ZNF7P17097 686 aaPredicted RBP1.99□□□□□ -2.09
MCF2-204ENST00000414978 IGHV1-2P23083 117 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 CFL1P23528 166 aaKnown RBP1.99□□□□□ -2.09
MCF2-204ENST00000414978 SERPINB5P36952 375 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 CACNG7P62955 275 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 ARFRP1Q13795 201 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 C16orf72Q14CZ0 275 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 KRTAP19-4Q3LI73 84 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 ZBED5Q49AG3 693 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 PLET1Q6UQ28 207 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 RDH10Q8IZV5 341 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 DUSP18Q8NEJ0 188 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 OR1M1Q8NGA1 313 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 RHOXF1Q8NHV9 184 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 GEMIN6Q8WXD5 167 aaKnown RBP1.99□□□□□ -2.09
MCF2-204ENST00000414978 OR8D1Q8WZ84 308 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 GTF2H4Q92759 462 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 SORCS2Q96PQ0 1159 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 FBXL15Q9H469 300 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 ISYNA1Q9NPH2 558 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 GIN1Q9NXP7 522 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 SAMHD1Q9Y3Z3 626 aaKnown RBP1.99□□□□□ -2.09
MCF2-204ENST00000414978 L3MBTL1Q9Y468 752 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 HEBP2Q9Y5Z4 205 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 SLC22A7Q9Y694 548 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 APCP25054 2843 aa1.99□□□□□ -2.09
MCF2-204ENST00000414978 CREBBPQ92793 2442 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 SYCE1LA8MT33 242 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 TMEM238C9JI98 176 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 XKRYO14609 159 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 CDIPTO14735 213 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 PRMT5O14744 637 aaPredicted RBP1.98□□□□□ -2.09
MCF2-204ENST00000414978 NDUFA2O43678 99 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 OR1I1O60431 355 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 SUPT3HO75486 399 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 PAK4O96013 591 aaPredicted RBP1.98□□□□□ -2.09
MCF2-204ENST00000414978 CD8AP01732 235 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 HCKP08631 526 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 GFAPP14136 432 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 AK4P27144 223 aaPredicted RBP1.98□□□□□ -2.09
MCF2-204ENST00000414978 HLA-DMAP28067 261 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 PSMD7P51665 324 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 DNAJB13P59910 316 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 RND3P61587 244 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 RPS21P63220 83 aaKnown RBP1.98□□□□□ -2.09
MCF2-204ENST00000414978 C9orf66Q5T8R8 295 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 PAMR1Q6UXH9 720 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 ZNF614Q8N883 585 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 NOXO1Q8NFA2 376 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 OR2A12Q8NGT7 310 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 STAG3L4Q8TBR4 150 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 SFXN5Q8TD22 340 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 CCDC124Q96CT7 223 aaKnown RBP1.98□□□□□ -2.09
MCF2-204ENST00000414978 RNF185Q96GF1 192 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 SPACA5Q96QH8 159 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 OR5M11Q96RB7 305 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 LYSMD1Q96S90 227 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 GPR21Q99679 349 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 C20orf27Q9GZN8 174 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 SAR1AQ9NR31 198 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 CLN6Q9NWW5 311 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 SPRR3Q9UBC9 169 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 KIF25Q9UIL4 384 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 PIKFYVEQ9Y2I7 2098 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 HIVEP3Q5T1R4 2406 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 IGKV1D-13A0A0B4J2D9 117 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 A8MT66 165 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 KPNA3O00505 521 aaPredicted RBP1.98□□□□□ -2.09
MCF2-204ENST00000414978 SUPT7LO94864 414 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 IGKV1-13P0DP09 117 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 ZNF30P17039 623 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 S100A2P29034 98 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms