RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ZNF785A8K8V0 405 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 H3BP45 60 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 IGLV3-19P01714 112 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 CTSDP07339 412 aaPredicted RBP15.18■□□□□ 0.02
PHRF1-202ENST00000413872 OR4A8P0C604 315 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 SLC25A4P12235 298 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 DGAT2L6Q6ZPD8 337 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 ZNF385AQ96PM9 386 aaKnown RBP15.18■□□□□ 0.02
PHRF1-202ENST00000413872 CHEK1O14757 476 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 ASAH2BP0C7U1 165 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 SMIM10L1P0DMW3 83 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 P2RX3P56373 397 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 COMMD1Q8N668 190 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 SMIM10Q96HG1 83 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 STARD10Q9Y365 291 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 OPRK1P41145 380 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 FAM162BQ5T6X4 162 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 RPL7L1Q6DKI1 246 aaKnown RBP15.18■□□□□ 0.02
PHRF1-202ENST00000413872 LRRTM1Q86UE6 522 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 WDR13Q9H1Z4 485 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 PRDM6Q9NQX0 595 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 SLC35D1Q9NTN3 355 aa15.18■□□□□ 0.02
PHRF1-202ENST00000413872 MRPS18AQ9NVS2 196 aaKnown RBP15.18■□□□□ 0.02
PHRF1-202ENST00000413872 UBE2L5PA0A1B0GUS4 154 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 GOSR1O95249 250 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 DUS4LO95620 317 aaKnown RBP15.17■□□□□ 0.02
PHRF1-202ENST00000413872 DHRS2Q13268 280 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 INSL4Q14641 139 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 GAB2Q9UQC2 676 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 RBP4P02753 201 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 GGTLC2Q14390 218 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 ATP6V1FQ16864 119 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 LSM2Q9Y333 95 aaKnown RBP15.17■□□□□ 0.02
PHRF1-202ENST00000413872 CST7O76096 145 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 IL13RA2Q14627 380 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 ST8SIA2Q92186 375 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 ANKRD20A5PA0PJZ0 165 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 TXNDC12O95881 172 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 ACP1P24666 158 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 ZNF90Q03938 601 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 ACSM6Q6P461 480 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 OR4F17Q8NGA8 305 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 OR13D1Q8NGV5 346 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 SMIM7Q9BQ49 75 aa15.17■□□□□ 0.02
PHRF1-202ENST00000413872 APC2O95996 2303 aa15.16■□□□□ 0.02
PHRF1-202ENST00000413872 LRRC3CA6NJW4 275 aa15.16■□□□□ 0.02
PHRF1-202ENST00000413872 CST4P01036 141 aa15.16■□□□□ 0.02
PHRF1-202ENST00000413872 SEMG1P04279 462 aa15.16■□□□□ 0.02
PHRF1-202ENST00000413872 RTP5Q14D33 572 aa15.16■□□□□ 0.02
PHRF1-202ENST00000413872 ZNF239Q16600 458 aaKnown RBP15.16■□□□□ 0.02
PHRF1-202ENST00000413872 MUC20Q8N307 709 aaPredicted RBP15.16■□□□□ 0.02
PHRF1-202ENST00000413872 GPR27Q9NS67 375 aa15.16■□□□□ 0.02
PHRF1-202ENST00000413872 NPTNQ9Y639 398 aa15.16■□□□□ 0.02
PHRF1-202ENST00000413872 IGHV3-43A0A0B4J1X8 118 aa15.16■□□□□ 0.02
PHRF1-202ENST00000413872 F2RL2O00254 374 aa15.16■□□□□ 0.02
PHRF1-202ENST00000413872 GSTZ1O43708 216 aaPredicted RBP15.16■□□□□ 0.02
PHRF1-202ENST00000413872 IGHV3-43DP0DP04 118 aa15.16■□□□□ 0.02
PHRF1-202ENST00000413872 PMP22Q01453 160 aa15.16■□□□□ 0.02
PHRF1-202ENST00000413872 NUBP1P53384 320 aa15.16■□□□□ 0.02
PHRF1-202ENST00000413872 PPP1R1AQ13522 171 aa15.16■□□□□ 0.02
PHRF1-202ENST00000413872 ZBTB37Q5TC79 503 aa15.16■□□□□ 0.02
PHRF1-202ENST00000413872 ZBTB34Q8NCN2 500 aa15.16■□□□□ 0.02
PHRF1-202ENST00000413872 CTRB1P17538 263 aa15.16■□□□□ 0.02
PHRF1-202ENST00000413872 SLC38A11Q08AI6 406 aa15.16■□□□□ 0.02
PHRF1-202ENST00000413872 CTRB2Q6GPI1 263 aa15.16■□□□□ 0.02
PHRF1-202ENST00000413872 MYO16Q9Y6X6 1858 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 TUBGCP6Q96RT7 1819 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 GREB1LQ9C091 1923 aaPredicted RBP15.15■□□□□ 0.02
PHRF1-202ENST00000413872 C9orf170A2RU37 121 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 IGF2P01344 180 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 CD1AP06126 327 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 RPS4Y2Q8TD47 263 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 RPUSD4Q96CM3 377 aaKnown RBP15.15■□□□□ 0.02
PHRF1-202ENST00000413872 MISP3Q96FF7 219 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 TMEM74BQ9NUR3 256 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 CLN8Q9UBY8 286 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 CACNG5Q9UF02 275 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 PCDHGA9Q9Y5G4 932 aaKnown RBP15.15■□□□□ 0.02
PHRF1-202ENST00000413872 GPX7Q96SL4 187 aaPredicted RBP15.15■□□□□ 0.02
PHRF1-202ENST00000413872 A0A0U1RQV5 110 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 PDZK1IP1Q13113 114 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 PHYHD1Q5SRE7 291 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 SLC16A12Q6ZSM3 486 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 C10orf111Q8N326 155 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 MRPS18BQ9Y676 258 aaKnown RBP15.15■□□□□ 0.02
PHRF1-202ENST00000413872 IFNL4K9M1U5 179 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 COX6A1P12074 109 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 TMEM65Q6PI78 240 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 ETV3LQ6ZN32 361 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 OR51I2Q9H344 312 aa15.15■□□□□ 0.02
PHRF1-202ENST00000413872 PTHLHP12272 177 aa15.14■□□□□ 0.01
PHRF1-202ENST00000413872 CTSSP25774 331 aa15.14■□□□□ 0.01
PHRF1-202ENST00000413872 LTBRP36941 435 aa15.14■□□□□ 0.01
PHRF1-202ENST00000413872 IGLV3-21P80748 117 aaPredicted RBP15.14■□□□□ 0.01
PHRF1-202ENST00000413872 SLC45A2Q9UMX9 530 aa15.14■□□□□ 0.01
PHRF1-202ENST00000413872 UPK3AO75631 287 aa15.14■□□□□ 0.01
PHRF1-202ENST00000413872 SCGB1D1O95968 90 aa15.14■□□□□ 0.01
PHRF1-202ENST00000413872 CELA2AP08217 269 aa15.14■□□□□ 0.01
PHRF1-202ENST00000413872 BCL3P20749 454 aa15.14■□□□□ 0.01
PHRF1-202ENST00000413872 ADIPOR1Q96A54 375 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms